Description

vacuolar protein sorting 13 homolog A [Source:HGNC Symbol;Acc:HGNC:1908]

Synonyms

CHAC, KIAA0986

Location
About this transcript

This transcript has 69 exons, is annotated with 24 domains and features, is associated with 2935 variations and maps to 1296 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VPS13A-203ENST00000360280.7153203174aaENSP00000353422
 
Protein coding
CCDS6655Q96RL7 NM_033305
NP_150648
TSL:1GENCODE basicAPPRIS P4
VPS13A-205ENST00000376636.7111453135aaENSP00000365823
 
Protein coding
CCDS55321Q96RL7 NM_001018037
NP_001018047
TSL:1GENCODE basicAPPRIS ALT2
VPS13A-204ENST00000376634.8102693069aaENSP00000365821
 
Protein coding
CCDS47983Q96RL7 NM_001018038
NP_001018048
TSL:1GENCODE basicAPPRIS ALT2
VPS13A-202ENST00000357409.999673095aaENSP00000349985
 
Protein coding
CCDS6656Q96RL7 NM_015186
NP_056001
TSL:1GENCODE basicAPPRIS ALT2
VPS13A-207ENST00000419472.12781383aaENSP00000414410
 
Protein coding
-H0Y7P8 -CDS 5' incompleteTSL:1
VPS13A-206ENST00000376646.32262110aaENSP00000365834
 
Protein coding
-A0A0B4J247 -TSL:5GENCODE basic
VPS13A-211ENST00000484581.61155110aaENSP00000446020
 
Protein coding
-A0A0B4J247 -TSL:2GENCODE basic
VPS13A-209ENST00000467124.132441aaENSP00000441840
 
Protein coding
-H0YG53 -CDS 5' incompleteTSL:5
VPS13A-212ENST00000493341.12001177aaENSP00000437478
 
Nonsense mediated decay
-H0YF78 -CDS 5' incompleteTSL:2
VPS13A-208ENST00000423463.62702No protein-
 
Processed transcript
---TSL:2
VPS13A-210ENST00000471439.1510No protein-
 
Processed transcript
---TSL:3
VPS13A-201ENST00000355766.5753No protein-
 
Retained intron
---TSL:3
VPS13A-213ENST00000539950.1390No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 69, Coding exons: 69, Transcript length: 10,269 bps, Translation length: 3,069 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS47983

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RL7

Transcript Support Level (TSL)

TSL:1

Version

ENST00000376634.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays