Description

tetratricopeptide repeat domain 39B [Source:HGNC Symbol;Acc:HGNC:23704]

Synonyms

FLJ33868, C9orf52

Location
About this transcript

This transcript has 20 exons, is annotated with 14 domains and features, is associated with 610 variations and maps to 403 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TTC39B-208ENST00000512701.610483682aaENSP00000422496
 
Protein coding
CCDS6477Q5VTQ0 NM_001168339
NM_152574
NP_001161811
NP_689787
TSL:2GENCODE basicAPPRIS P3
TTC39B-202ENST00000380850.83221669aaENSP00000370231
 
Protein coding
CCDS55296Q5VTQ0 NM_001168340
NP_001161812
TSL:2GENCODE basicAPPRIS ALT2
TTC39B-201ENST00000297615.93053613aaENSP00000297615
 
Protein coding
CCDS55295Q5VTQ0 NM_001168341
NP_001161813
TSL:2GENCODE basicAPPRIS ALT2
TTC39B-206ENST00000507285.52243517aaENSP00000426539
 
Protein coding
CCDS55294Q5VTQ0 -TSL:5GENCODE basicAPPRIS ALT2
TTC39B-207ENST00000507993.51950517aaENSP00000423392
 
Protein coding
CCDS55294Q5VTQ0 NM_001168342
NP_001161814
TSL:2GENCODE basicAPPRIS ALT2
TTC39B-205ENST00000506891.190069aaENSP00000427314
 
Protein coding
-H0YAJ6 -CDS 5' incompleteTSL:1
TTC39B-209ENST00000582994.1567No protein-
 
Processed transcript
---TSL:4
TTC39B-204ENST00000505732.51881No protein-
 
Retained intron
---TSL:1
TTC39B-203ENST00000380853.11326No protein-
 
Retained intron
---TSL:1
Statistics

Exons: 20, Coding exons: 16, Transcript length: 2,243 bps, Translation length: 517 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55294

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VTQ0

Transcript Support Level (TSL)

TSL:5

Version

ENST00000507285.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays