Description

tropomyosin 1 (alpha) [Source:HGNC Symbol;Acc:HGNC:12010]

Synonyms

C15orf13, CMH3

Location
About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 319 variations and maps to 514 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TPM1-206ENST00000358278.71717284aaENSP00000351022
 
Protein coding
CCDS32263D9YZV5 P09493 NM_001018006
NP_001018006
TSL:1GENCODE basicAPPRIS P3
TPM1-201ENST00000267996.111670284aaENSP00000267996
 
Protein coding
CCDS32262A0A024R5W6 P09493 NM_001018007
NP_001018007
TSL:1GENCODE basic
TPM1-219ENST00000559397.51655284aaENSP00000452879
 
Protein coding
CCDS58368P09493 NM_001018020
NP_001018020
TSL:2GENCODE basic
TPM1-204ENST00000334895.91637245aaENSP00000334624
 
Protein coding
CCDS32264D9YZV7 P09493 NM_001018008
NP_001018008
TSL:1GENCODE basic
TPM1-208ENST00000404484.81568248aaENSP00000384315
 
Protein coding
CCDS81892H7BYY1 NM_001301289
NM_001330344
NP_001288218
NP_001317273
TSL:1GENCODE basicAPPRIS ALT1
TPM1-202ENST00000288398.101295284aaENSP00000288398
 
Protein coding
CCDS10181A0A0K0K1I0 P09493 NM_000366
NP_000357
TSL:1GENCODE basic
TPM1-207ENST00000403994.71049284aaENSP00000385107
 
Protein coding
CCDS45273D9YZV4 P09493 NM_001018005
NM_001301244
NP_001018005
NP_001288173
TSL:1GENCODE basicAPPRIS ALT1
TPM1-220ENST00000559556.5977284aaENSP00000453941
 
Protein coding
CCDS58369P09493 NM_001018004
NP_001018004
TSL:2GENCODE basicAPPRIS ALT1
TPM1-218ENST00000559281.5851248aaENSP00000452658
 
Protein coding
CCDS81894H0YK48 NM_001330346
NP_001317275
TSL:5GENCODE basic
TPM1-203ENST00000317516.11738245aaENSP00000322577
 
Protein coding
CCDS81891F5H7S3 NM_001330351
NP_001317280
TSL:1GENCODE basic
TPM1-233ENST00000610733.13957106aaENSP00000477929
 
Protein coding
-A0A087WTJ7 -TSL:2GENCODE basic
TPM1-205ENST00000357980.81800326aaENSP00000350667
 
Protein coding
-Q6ZN40 -TSL:2GENCODE basic
TPM1-216ENST00000558910.2123233aaENSP00000452830
 
Protein coding
-H0YKJ4 -CDS 5' incompleteTSL:2
TPM1-227ENST00000560970.51039265aaENSP00000453062
 
Protein coding
-H0YL52 -CDS 5' incompleteTSL:1
TPM1-226ENST00000560959.5925275aaENSP00000453724
 
Protein coding
-B7Z596 -TSL:2GENCODE basic
TPM1-230ENST00000561266.5671223aaENSP00000453955
 
Protein coding
-H0YNC7 -CDS 5' incompleteTSL:3
TPM1-224ENST00000560615.5570108aaENSP00000453050
 
Protein coding
-H0YL42 -CDS 3' incompleteTSL:3
TPM1-223ENST00000560445.148570aaENSP00000452999
 
Protein coding
-H0YKZ6 -TSL:3GENCODE basic
TPM1-225ENST00000560679.12928aaENSP00000453136
 
Protein coding
-A0A0G2JL94 -CDS 3' incompleteTSL:3
TPM1-210ENST00000558264.5268792aaENSP00000452624
 
Nonsense mediated decay
-H0YK20 -TSL:2
TPM1-212ENST00000558347.51525157aaENSP00000452887
 
Nonsense mediated decay
-H0YKP3 -TSL:5
TPM1-214ENST00000558544.5139949aaENSP00000453817
 
Nonsense mediated decay
-H0YN06 -TSL:5
TPM1-231ENST00000561395.567368aaENSP00000453092
 
Nonsense mediated decay
-H0YL80 -CDS 5' incompleteTSL:5
TPM1-232ENST00000561425.558240aaENSP00000453324
 
Nonsense mediated decay
-H0YLS7 -TSL:5
TPM1-221ENST00000559831.5573142aaENSP00000452977
 
Nonsense mediated decay
-H0YKX5 -CDS 5' incompleteTSL:5
TPM1-228ENST00000560975.52855No protein-
 
Retained intron
---TSL:5
TPM1-211ENST00000558314.51031No protein-
 
Retained intron
---TSL:1
TPM1-229ENST00000561242.1673No protein-
 
Retained intron
---TSL:2
TPM1-213ENST00000558400.1658No protein-
 
Retained intron
---TSL:2
TPM1-215ENST00000558868.5653No protein-
 
Retained intron
---TSL:2
TPM1-222ENST00000560131.1537No protein-
 
Retained intron
---TSL:2
TPM1-209ENST00000558072.5525No protein-
 
Retained intron
---TSL:2
TPM1-217ENST00000559108.1437No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,655 bps, Translation length: 284 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58368

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09493

Transcript Support Level (TSL)

TSL:2

Version

ENST00000559397.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays