Description

U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]

Synonyms

HVSL1, FLJ13154, C16orf57, Mpn1

Location
About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 233 variations and maps to 385 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
USB1-201ENST00000219281.72282265aaENSP00000219281
 
Protein coding
CCDS10791A0A024R6V6 Q9BQ65 NM_024598
NP_078874
TSL:1GENCODE basicAPPRIS P1
USB1-207ENST00000563149.11751163aaENSP00000454692
 
Protein coding
CCDS81990H3BN52 NM_001330569
NP_001317498
TSL:2GENCODE basic
USB1-202ENST00000423271.71217186aaENSP00000409792
 
Protein coding
CCDS55997Q9BQ65 NM_001204911
NP_001191840
TSL:2GENCODE basic
USB1-203ENST00000539737.61212247aaENSP00000446143
 
Protein coding
CCDS55998Q9BQ65 NM_001195302
NP_001182231
TSL:2GENCODE basic
USB1-205ENST00000561743.51135214aaENSP00000454928
 
Protein coding
CCDS81991H3BNM8 NM_001330568
NP_001317497
TSL:3GENCODE basic
USB1-204ENST00000561568.5671182aaENSP00000457322
 
Protein coding
-H3BTT8 -CDS 3' incompleteTSL:4
USB1-209ENST00000564387.555895aaENSP00000457302
 
Nonsense mediated decay
-H3BTS1 -TSL:4
USB1-211ENST00000565662.5719No protein-
 
Processed transcript
---TSL:4
USB1-215ENST00000569252.5573No protein-
 
Processed transcript
---TSL:4
USB1-206ENST00000562534.5562No protein-
 
Processed transcript
---TSL:4
USB1-214ENST00000568848.5548No protein-
 
Processed transcript
---TSL:4
USB1-208ENST00000563207.1464No protein-
 
Processed transcript
---TSL:5
USB1-212ENST00000566082.13888No protein-
 
Retained intron
---TSL:2
USB1-210ENST00000565151.1886No protein-
 
Retained intron
---TSL:2
USB1-213ENST00000566292.5575No protein-
 
Retained intron
---TSL:2
USB1-216ENST00000624720.12895No protein-
 
TEC
---TSL:NA
Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,282 bps, Translation length: 265 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10791

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ65

Transcript Support Level (TSL)

TSL:1

Version

ENST00000219281.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays