Description

retinitis pigmentosa GTPase regulator interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13436]

Synonyms

RPGRIP, RGI1, LCA6, CORD13

Location
About this transcript

This transcript has 13 exons, is annotated with 9 domains and features, is associated with 1000 variations and maps to 394 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RPGRIP1-202ENST00000400017.639401286aaENSP00000382895
 
Protein coding
CCDS45080Q96KN7 NM_020366
NP_065099
TSL:1GENCODE basicAPPRIS P2
RPGRIP1-213ENST00000557771.538701248aaENSP00000451219
 
Protein coding
-G3V3F7 -TSL:5GENCODE basicAPPRIS ALT2
RPGRIP1-210ENST00000556336.52955943aaENSP00000450445
 
Protein coding
-G3V236 -TSL:5GENCODE basic
RPGRIP1-209ENST00000555587.52371761aaENSP00000451262
 
Protein coding
-G3V3I7 -CDS 5' incompleteTSL:1APPRIS ALT2
RPGRIP1-201ENST00000382933.82004612aaENSP00000372391
 
Protein coding
-Q96KN7 -TSL:1GENCODE basic
RPGRIP1-211ENST00000557351.1566166aaENSP00000452215
 
Protein coding
-G3V577 -CDS 3' incompleteTSL:4
RPGRIP1-205ENST00000554303.1429143aaENSP00000450426
 
Protein coding
-H0YIY1 -CDS 5' and 3' incompleteTSL:1
RPGRIP1-212ENST00000557606.1402134aaENSP00000451719
 
Protein coding
-H0YJK6 -CDS 5' and 3' incompleteTSL:5
RPGRIP1-207ENST00000555322.5237326aaENSP00000450662
 
Nonsense mediated decay
-H0YJ18 -CDS 5' incompleteTSL:1
RPGRIP1-208ENST00000555489.5213959aaENSP00000451044
 
Nonsense mediated decay
-H0YJ99 -CDS 5' incompleteTSL:1
RPGRIP1-203ENST00000553500.5585No protein-
 
Processed transcript
---TSL:4
RPGRIP1-204ENST00000553927.12875No protein-
 
Retained intron
---TSL:2
RPGRIP1-206ENST00000554750.1571No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,371 bps, Translation length: 761 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 5' incomplete

Version

ENST00000555587.5

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays