Description

retinitis pigmentosa GTPase regulator interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13436]

Synonyms

CORD13, LCA6, RPGRIP, RGI1

Location
About this transcript

This transcript has 24 exons, is annotated with 15 domains and features, is associated with 1625 variations and maps to 605 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RPGRIP1-202ENST00000400017.639401286aaENSP00000382895
 
Protein coding
CCDS45080Q96KN7 NM_020366
NP_065099
TSL:1GENCODE basicAPPRIS P2
RPGRIP1-213ENST00000557771.538701248aaENSP00000451219
 
Protein coding
-G3V3F7 -TSL:5GENCODE basicAPPRIS ALT2
RPGRIP1-210ENST00000556336.52955943aaENSP00000450445
 
Protein coding
-G3V236 -TSL:5GENCODE basic
RPGRIP1-209ENST00000555587.52371761aaENSP00000451262
 
Protein coding
-G3V3I7 -CDS 5' incompleteTSL:1APPRIS ALT2
RPGRIP1-201ENST00000382933.82004612aaENSP00000372391
 
Protein coding
-Q96KN7 -TSL:1GENCODE basic
RPGRIP1-211ENST00000557351.1566166aaENSP00000452215
 
Protein coding
-G3V577 -CDS 3' incompleteTSL:4
RPGRIP1-205ENST00000554303.1429143aaENSP00000450426
 
Protein coding
-H0YIY1 -CDS 5' and 3' incompleteTSL:1
RPGRIP1-212ENST00000557606.1402134aaENSP00000451719
 
Protein coding
-H0YJK6 -CDS 5' and 3' incompleteTSL:5
RPGRIP1-207ENST00000555322.5237326aaENSP00000450662
 
Nonsense mediated decay
-H0YJ18 -CDS 5' incompleteTSL:1
RPGRIP1-208ENST00000555489.5213959aaENSP00000451044
 
Nonsense mediated decay
-H0YJ99 -CDS 5' incompleteTSL:1
RPGRIP1-203ENST00000553500.5585No protein-
 
Processed transcript
---TSL:4
RPGRIP1-204ENST00000553927.12875No protein-
 
Retained intron
---TSL:2
RPGRIP1-206ENST00000554750.1571No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 24, Coding exons: 24, Transcript length: 3,940 bps, Translation length: 1,286 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45080

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96KN7

Transcript Support Level (TSL)

TSL:1

Version

ENST00000400017.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays