Description

spermatogenesis associated 7 [Source:HGNC Symbol;Acc:HGNC:20423]

Synonyms

HSD3, LCA3

Location
About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 411 variations and maps to 338 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SPATA7-217ENST00000556553.52301567aaENSP00000451128
 
Protein coding
CCDS32132Q9P0W8 -TSL:1GENCODE basicAPPRIS ALT2
SPATA7-203ENST00000393545.82123599aaENSP00000377176
 
Protein coding
CCDS9883Q9P0W8 V9HVY9 NM_018418
NP_060888
TSL:1GENCODE basicAPPRIS P3
SPATA7-202ENST00000356583.91891567aaENSP00000348991
 
Protein coding
CCDS32132Q9P0W8 NM_001040428
NP_001035518
TSL:1GENCODE basicAPPRIS ALT2
SPATA7-201ENST00000045347.111410458aaENSP00000045347
 
Protein coding
-Q9P0W8 -TSL:5GENCODE basicAPPRIS ALT2
SPATA7-206ENST00000553885.5805228aaENSP00000450606
 
Protein coding
-G3V2E1 -CDS 3' incompleteTSL:3APPRIS ALT2
SPATA7-216ENST00000556406.575891aaENSP00000450809
 
Protein coding
-H0YJ48 -CDS 5' incompleteTSL:3APPRIS ALT2
SPATA7-212ENST00000555401.5545138aaENSP00000452435
 
Protein coding
-G3V5N2 -CDS 3' incompleteTSL:3APPRIS ALT2
SPATA7-210ENST00000554802.140176aaENSP00000451019
 
Protein coding
-H0YJ93 -CDS 5' incompleteTSL:3APPRIS ALT2
SPATA7-213ENST00000555515.5108881aaENSP00000450882
 
Nonsense mediated decay
-G3V2V4 -TSL:3
SPATA7-214ENST00000555534.589085aaENSP00000450515
 
Nonsense mediated decay
-G3V287 -TSL:3
SPATA7-220ENST00000557248.580486aaENSP00000451690
 
Nonsense mediated decay
-G3V4A9 -TSL:3
SPATA7-219ENST00000556870.578653aaENSP00000452359
 
Nonsense mediated decay
-G3V5H6 -TSL:3
SPATA7-207ENST00000553908.576149aaENSP00000452546
 
Nonsense mediated decay
-G3V5V8 -TSL:5
SPATA7-209ENST00000554168.565146aaENSP00000451663
 
Nonsense mediated decay
-G3V491 -TSL:4
SPATA7-211ENST00000555356.559246aaENSP00000450654
 
Nonsense mediated decay
-G3V491 -TSL:4
SPATA7-222ENST00000557724.556846aaENSP00000452364
 
Nonsense mediated decay
-G3V491 -TSL:4
SPATA7-215ENST00000555715.554542aaENSP00000451181
 
Nonsense mediated decay
-G3V3D2 -TSL:4
SPATA7-208ENST00000554102.5501No protein-
 
Processed transcript
---TSL:3
SPATA7-205ENST00000553626.53610No protein-
 
Retained intron
---TSL:2
SPATA7-218ENST00000556666.52380No protein-
 
Retained intron
---TSL:2
SPATA7-204ENST00000553303.1885No protein-
 
Retained intron
---TSL:2
SPATA7-221ENST00000557567.1457No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,410 bps, Translation length: 458 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0W8

Transcript Support Level (TSL)

TSL:5

Version

ENST00000045347.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays