Description

spermatogenesis associated 7 [Source:HGNC Symbol;Acc:HGNC:20423]

Synonyms

HSD3, LCA3

Location
About this transcript

This transcript has 12 exons, is annotated with 5 domains and features, is associated with 511 variations and maps to 461 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SPATA7-217ENST00000556553.52301567aaENSP00000451128
 
Protein coding
CCDS32132Q9P0W8 -TSL:1GENCODE basicAPPRIS ALT2
SPATA7-203ENST00000393545.82123599aaENSP00000377176
 
Protein coding
CCDS9883Q9P0W8 V9HVY9 NM_018418
NP_060888
TSL:1GENCODE basicAPPRIS P3
SPATA7-202ENST00000356583.91891567aaENSP00000348991
 
Protein coding
CCDS32132Q9P0W8 NM_001040428
NP_001035518
TSL:1GENCODE basicAPPRIS ALT2
SPATA7-201ENST00000045347.111410458aaENSP00000045347
 
Protein coding
-Q9P0W8 -TSL:5GENCODE basicAPPRIS ALT2
SPATA7-206ENST00000553885.5805228aaENSP00000450606
 
Protein coding
-G3V2E1 -CDS 3' incompleteTSL:3APPRIS ALT2
SPATA7-216ENST00000556406.575891aaENSP00000450809
 
Protein coding
-H0YJ48 -CDS 5' incompleteTSL:3APPRIS ALT2
SPATA7-212ENST00000555401.5545138aaENSP00000452435
 
Protein coding
-G3V5N2 -CDS 3' incompleteTSL:3APPRIS ALT2
SPATA7-210ENST00000554802.140176aaENSP00000451019
 
Protein coding
-H0YJ93 -CDS 5' incompleteTSL:3APPRIS ALT2
SPATA7-213ENST00000555515.5108881aaENSP00000450882
 
Nonsense mediated decay
-G3V2V4 -TSL:3
SPATA7-214ENST00000555534.589085aaENSP00000450515
 
Nonsense mediated decay
-G3V287 -TSL:3
SPATA7-220ENST00000557248.580486aaENSP00000451690
 
Nonsense mediated decay
-G3V4A9 -TSL:3
SPATA7-219ENST00000556870.578653aaENSP00000452359
 
Nonsense mediated decay
-G3V5H6 -TSL:3
SPATA7-207ENST00000553908.576149aaENSP00000452546
 
Nonsense mediated decay
-G3V5V8 -TSL:5
SPATA7-209ENST00000554168.565146aaENSP00000451663
 
Nonsense mediated decay
-G3V491 -TSL:4
SPATA7-211ENST00000555356.559246aaENSP00000450654
 
Nonsense mediated decay
-G3V491 -TSL:4
SPATA7-222ENST00000557724.556846aaENSP00000452364
 
Nonsense mediated decay
-G3V491 -TSL:4
SPATA7-215ENST00000555715.554542aaENSP00000451181
 
Nonsense mediated decay
-G3V3D2 -TSL:4
SPATA7-208ENST00000554102.5501No protein-
 
Processed transcript
---TSL:3
SPATA7-205ENST00000553626.53610No protein-
 
Retained intron
---TSL:2
SPATA7-218ENST00000556666.52380No protein-
 
Retained intron
---TSL:2
SPATA7-204ENST00000553303.1885No protein-
 
Retained intron
---TSL:2
SPATA7-221ENST00000557567.1457No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,123 bps, Translation length: 599 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9883

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0W8

Transcript Support Level (TSL)

TSL:1

Version

ENST00000393545.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays