Human (GRCh38.p14)
Description

integrin subunit alpha L [Source:HGNC Symbol;Acc:HGNC:6148]

Gene Synonyms

CD11A, LFA-1, LFA1A

Location
About this transcript

This transcript has 31 exons, is annotated with 136 domains and features, is associated with 23449 variant alleles and maps to 824 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000356798.11ITGAL-20151291170aaENSP00000349252.5
 
Protein coding
CCDS32433P20701-1 NM_002209.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000358164.9ITGAL-20246731086aaENSP00000350886.5
 
Protein coding
CCDS45461P20701-3 -GENCODE basicTSL:1
ENST00000679323.1ITGAL-2222603369aaENSP00000504443.1
 
Protein coding
A0A7I2V5G1 -CDS 5' incomplete
ENST00000433423.2ITGAL-2031416404aaENSP00000409377.2
 
Protein coding
B4E021 -GENCODE basicTSL:2
ENST00000569725.1ITGAL-21754541aaENSP00000461006.1
 
Protein coding
I3L468 -TSL:2CDS 3' incomplete
ENST00000676652.1ITGAL-2187524309aaENSP00000503942.1
 
Nonsense mediated decay
A0A7I2V4B0 -CDS 5' incomplete
ENST00000678203.1ITGAL-2205711124aaENSP00000504379.1
 
Nonsense mediated decay
A0A7I2V582 --
ENST00000677830.1ITGAL-2194916229aaENSP00000503623.1
 
Nonsense mediated decay
A0A7I2V498 --
ENST00000562857.5ITGAL-206821162aaENSP00000454342.1
 
Nonsense mediated decay
B4DQ77 -TSL:5
ENST00000563615.5ITGAL-20757538aaENSP00000458739.1
 
Nonsense mediated decay
I3L1D1 -TSL:4CDS 5' incomplete
ENST00000562652.1ITGAL-20556190aaENSP00000456521.1
 
Nonsense mediated decay
H3BS37 -TSL:4
ENST00000568926.5ITGAL-215559109aaENSP00000457785.1
 
Nonsense mediated decay
H3BUT3 -TSL:4
ENST00000565864.5ITGAL-21153655aaENSP00000454908.1
 
Nonsense mediated decay
H3BNL5 -TSL:2
ENST00000678574.1ITGAL-2212334No protein-
 
Protein coding CDS not defined
---
ENST00000568012.5ITGAL-214575No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000565348.5ITGAL-210557No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000566267.1ITGAL-213537No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000564632.1ITGAL-208964No protein-
 
Retained intron
--TSL:2
ENST00000564935.1ITGAL-209585No protein-
 
Retained intron
--TSL:2
ENST00000562020.1ITGAL-204561No protein-
 
Retained intron
--TSL:4
ENST00000568987.1ITGAL-216549No protein-
 
Retained intron
--TSL:5
ENST00000566149.1ITGAL-212443No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 31, Coding exons: 31, Transcript length: 5,129 bps, Translation length: 1,170 residues

MANE

This MANE Select transcript contains ENSP00000349252 and matches to NM_002209.3 and NP_002200.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P20701

CCDS

This transcript is a member of the Human CCDS set: CCDS32433

Transcript Support Level (TSL)

TSL:1

Version

ENST00000356798.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.