Transcript: ENST00000422059.5 SCIRT-201

Description

stem cell inhibitory RNA transcript [Source:HGNC Symbol;Acc:HGNC:55341]

Gene Synonyms

AL109615.3, DATOC-1

Location

Chromosome 6: 43,995,723-44,074,652 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 33889 variant alleles and maps to 249 oligo probes.

Gene

This transcript is a product of gene ENSG00000237686.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000687455.1	SCIRT-207	838	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000422059.5	SCIRT-201	2232	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000652850.1	SCIRT-203	1985	No protein	-	lncRNA	-	-
ENST00000687275.1	SCIRT-206	1336	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000687843.1	SCIRT-208	1197	No protein	-	lncRNA	-	-
ENST00000687158.2	SCIRT-205	1124	No protein	-	lncRNA	-	-
ENST00000655938.1	SCIRT-204	751	No protein	-	lncRNA	-	-
ENST00000607590.1	SCIRT-202	556	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,232 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000422059.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000422059.5 SCIRT-201

Summary

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Transcript: ENST00000422059.5 SCIRT-201

Summary

About Us

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