Human (GRCh38.p14)
Description

serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]

Gene Synonyms

CSHMT, MGC15229, MGC24556, SHMT

Location
About this transcript

This transcript has 3 exons, is associated with 5291 variant alleles and maps to 119 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000316694.8SHMT1-2012527483aaENSP00000318868.3
 
Protein coding
CCDS11196P34896-1 NM_004169.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000583780.2SHMT1-2092469483aaENSP00000462041.2
 
Protein coding
CCDS11196--APPRIS P1TSL:1
ENST00000354098.7SHMT1-2021656444aaENSP00000318805.3
 
Protein coding
CCDS11197P34896-2 -GENCODE basicTSL:1
ENST00000582653.1SHMT1-208879167aaENSP00000462227.1
 
Protein coding
J3KRZ5 -TSL:3CDS 3' incomplete
ENST00000580002.5SHMT1-2061759128aaENSP00000462043.1
 
Nonsense mediated decay
J3KRK5 -TSL:2
ENST00000582352.1SHMT1-2072756No protein-
 
Retained intron
--TSL:NA
ENST00000395684.5SHMT1-2042652No protein-
 
Retained intron
--TSL:1
ENST00000579558.5SHMT1-2051077No protein-
 
Retained intron
--TSL:2
ENST00000395682.3SHMT1-203570No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 3, Coding exons: 0, Transcript length: 570 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000395682.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.