Human (GRCh38.p14)
Description

ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:811]

Gene Synonyms

ATP2A, SERCA1

Location
About this transcript

This transcript has 23 exons, is annotated with 42 domains and features, is associated with 13206 variant alleles and maps to 595 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000395503.9ATP2A1-2023493994aaENSP00000378879.5
 
Protein coding
CCDS42139O14983-2 NM_004320.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000357084.7ATP2A1-20135321001aaENSP00000349595.3
 
Protein coding
CCDS10643O14983-1 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000536376.5ATP2A1-2033130869aaENSP00000443101.1
 
Protein coding
CCDS66997O14983-3 -GENCODE basicTSL:2
ENST00000562185.5ATP2A1-20457626aaENSP00000457798.1
 
Protein coding
H3BUU3 -TSL:2CDS 3' incomplete
ENST00000563975.1ATP2A1-205545113aaENSP00000458035.1
 
Protein coding
H3BVB2 -TSL:2CDS 3' incomplete
ENST00000564112.1ATP2A1-20619524aaENSP00000457793.1
 
Protein coding
H3BUT9 -TSL:3CDS 5' incomplete
ENST00000564732.1ATP2A1-208831128aaENSP00000457357.1
 
Nonsense mediated decay
H3BTW4 -TSL:5CDS 5' incomplete
ENST00000564470.1ATP2A1-20746741aaENSP00000457148.1
 
Nonsense mediated decay
H3BTF1 -TSL:1CDS 5' incomplete
ENST00000565042.5ATP2A1-209239No protein-
 
Protein coding CDS not defined
--TSL:1
Statistics

Exons: 23, Coding exons: 22, Transcript length: 3,493 bps, Translation length: 994 residues

MANE

This MANE Select transcript contains ENSP00000378879 and matches to NM_004320.6 and NP_004311.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O14983

CCDS

This transcript is a member of the Human CCDS set: CCDS42139

Transcript Support Level (TSL)

TSL:1

Version

ENST00000395503.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.