Human (GRCh38.p14)
Description

C9orf72-SMCR8 complex subunit [Source:HGNC Symbol;Acc:HGNC:28337]

Gene Synonyms

DENND9, DENNL72, MGC23980

Location
About this transcript

This transcript has 11 exons, is annotated with 9 domains and features, is associated with 12750 variant alleles and maps to 389 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000380003.8C9orf72-2033231481aaENSP00000369339.3
 
Protein coding
CCDS6522Q96LT7-1 NM_018325.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000619707.5C9orf72-2053338481aaENSP00000482753.1
 
Protein coding
CCDS6522Q96LT7-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000644136.1C9orf72-2062678492aaENSP00000494872.1
 
Protein coding
A0A2R8Y5K2 -GENCODE basic
ENST00000379997.7C9orf72-2021873222aaENSP00000369333.3
 
Protein coding
CCDS6523Q96LT7-2 -GENCODE basicTSL:2
ENST00000647196.1C9orf72-2071398373aaENSP00000494839.1
 
Protein coding
A0A2R8Y5U5 -GENCODE basic
ENST00000379995.1C9orf72-201777222aaENSP00000369331.1
 
Protein coding
CCDS6523Q96LT7-2 -GENCODE basicTSL:3
ENST00000673600.1C9orf72-2082318431aaENSP00000500650.1
 
Nonsense mediated decay
A0A5F9ZHW7 --
ENST00000488117.5C9orf72-2044808No protein-
 
Protein coding CDS not defined
--TSL:2
Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,231 bps, Translation length: 481 residues

MANE

This MANE Select transcript contains ENSP00000369339 and matches to NM_018325.5 and NP_060795.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96LT7

CCDS

This transcript is a member of the Human CCDS set: CCDS6522

Transcript Support Level (TSL)

TSL:1

Version

ENST00000380003.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.