Human (GRCh38.p14)
Description

C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]

Gene Synonyms

CKB4, EXODUS-1, LARC, MIP-3A, SCYA20, ST38

About this transcript

This transcript has 4 exons, is annotated with 25 domains and features, is associated with 1549 variant alleles and maps to 282 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000358813.5CCL20-20183496aaENSP00000351671.4
 
Protein coding
CCDS2469P78556-1 NM_004591.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000409189.7CCL20-20283995aaENSP00000386273.3
 
Protein coding
CCDS46536P78556-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000646475.1CCL20-20539725aaENSP00000496658.1
 
Protein coding
A0A2R8Y806 -CDS 3' incomplete
ENST00000473642.1CCL20-203680No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000489160.1CCL20-204673No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 4, Coding exons: 4, Transcript length: 834 bps, Translation length: 96 residues

MANE

This MANE Select transcript contains ENSP00000351671 and matches to NM_004591.3 and NP_004582.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78556

CCDS

This transcript is a member of the Human CCDS set: CCDS2469

Transcript Support Level (TSL)

TSL:1

Version

ENST00000358813.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.