Human (GRCh38.p14)
Description

lipopolysaccharide induced TNF factor [Source:HGNC Symbol;Acc:HGNC:16841]

Gene Synonyms

FLJ38636, PIG7, SIMPLE, TP53I7

Location
About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 19845 variant alleles and maps to 497 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000622633.5LITAF-2192440161aaENSP00000483114.1
 
Protein coding
CCDS32386Q99732-1 NM_001136472.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000571688.5LITAF-2082632161aaENSP00000459533.1
 
Protein coding
CCDS32386Q99732-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000339430.9LITAF-2012356161aaENSP00000340118.5
 
Protein coding
CCDS32386Q99732-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000413364.6LITAF-2022292152aaENSP00000397958.2
 
Protein coding
CCDS45411Q99732-3 -GENCODE basicTSL:2
ENST00000570904.5LITAF-2041118161aaENSP00000459138.1
 
Protein coding
CCDS32386Q99732-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000574763.5LITAF-214717161aaENSP00000461813.1
 
Protein coding
CCDS32386Q99732-1 -GENCODE basicAPPRIS P1TSL:3
ENST00000571459.5LITAF-20667775aaENSP00000459603.1
 
Protein coding
I3L2E2 -GENCODE basicTSL:5
ENST00000576036.5LITAF-217603161aaENSP00000461667.1
 
Protein coding
CCDS32386Q99732-1 -GENCODE basicAPPRIS P1TSL:4
ENST00000570798.5LITAF-203593137aaENSP00000458871.1
 
Protein coding
I3L1I9 -TSL:4CDS 3' incomplete
ENST00000571277.1LITAF-20558739aaENSP00000459026.1
 
Protein coding
I3L1R0 -TSL:4CDS 3' incomplete
ENST00000571627.5LITAF-207579153aaENSP00000460743.1
 
Protein coding
I3L3U8 -TSL:4CDS 3' incomplete
ENST00000576334.1LITAF-21855633aaENSP00000458538.1
 
Protein coding
I3L133 -TSL:4CDS 3' incomplete
ENST00000574848.5LITAF-21555488aaENSP00000459898.1
 
Protein coding
I3L2T1 -TSL:4CDS 3' incomplete
ENST00000574701.5LITAF-212553136aaENSP00000458981.1
 
Protein coding
I3L1P1 -TSL:4CDS 3' incomplete
ENST00000571976.1LITAF-209548126aaENSP00000460133.1
 
Protein coding
I3L329 -GENCODE basicTSL:2
ENST00000572255.5LITAF-21051668aaENSP00000458836.1
 
Protein coding
I3L1H3 -GENCODE basicTSL:4
ENST00000574703.5LITAF-213486105aaENSP00000459913.1
 
Protein coding
I3L2T6 -GENCODE basicTSL:2
ENST00000573332.5LITAF-21177381aaENSP00000460873.1
 
Nonsense mediated decay
I3L409 -TSL:4
ENST00000575426.1LITAF-21658210aaENSP00000459094.1
 
Nonsense mediated decay
A0A0G2JLC4 -TSL:5CDS 5' incomplete
Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,356 bps, Translation length: 161 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99732

CCDS

This transcript is a member of the Human CCDS set: CCDS32386

Transcript Support Level (TSL)

TSL:1

Version

ENST00000339430.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.