Human (GRCh38.p14)
Description

NIPBL cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]

Gene Synonyms

DKFZP434L1319, FLJ11203, FLJ12597, FLJ13354, FLJ13648, IDN3, SCC2

Location
About this transcript

This transcript has 47 exons, is annotated with 47 domains and features, is associated with 83817 variant alleles and maps to 1470 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000282516.13NIPBL-201104252804aaENSP00000282516.8
 
Protein coding
CCDS3920Q6KC79-1 NM_133433.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000652901.1NIPBL-20992282649aaENSP00000499536.1
 
Protein coding
A0A590UJS4 -GENCODE basic
ENST00000448238.2NIPBL-20287292697aaENSP00000406266.2
 
Protein coding
CCDS47198Q6KC79-2 -GENCODE basicTSL:1
ENST00000513819.1NIPBL-207452150aaENSP00000421504.1
 
Protein coding
H0Y8M3 -TSL:3CDS 5' and 3' incomplete
ENST00000504430.5NIPBL-2043455No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000505998.5NIPBL-205969No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000503274.1NIPBL-203789No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000509429.1NIPBL-206586No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000514335.1NIPBL-2082948No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 47, Coding exons: 46, Transcript length: 10,425 bps, Translation length: 2,804 residues

MANE

This MANE Select transcript contains ENSP00000282516 and matches to NM_133433.4 and NP_597677.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6KC79

CCDS

This transcript is a member of the Human CCDS set: CCDS3920

Transcript Support Level (TSL)

TSL:1

Version

ENST00000282516.13

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.