Human (GRCh38.p14)
Description

NPC intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7897]

Gene Synonyms

SLC65A1

Location
About this transcript

This transcript has 25 exons, is annotated with 49 domains and features, is associated with 27860 variant alleles and maps to 829 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000269228.10NPC1-20147601278aaENSP00000269228.4
 
Protein coding
CCDS11878O15118-1 NM_000271.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000591051.1NPC1-2103171971aaENSP00000467636.1
 
Protein coding
K7EQ23 -TSL:2CDS 5' incomplete
ENST00000593280.2NPC1-214160742aaENSP00000467150.1
 
Protein coding
K7ENZ0 -TSL:1CDS 5' incomplete
ENST00000591107.6NPC1-212890179aaENSP00000468438.1
 
Protein coding
K7ERW2 -TSL:3CDS 5' incomplete
ENST00000590723.5NPC1-20975559aaENSP00000464755.1
 
Protein coding
K7EIH7 -TSL:4CDS 5' incomplete
ENST00000586150.5NPC1-203571175aaENSP00000468321.1
 
Protein coding
K7ERM4 -TSL:3CDS 5' incomplete
ENST00000540608.5NPC1-2022790No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000587223.1NPC1-206590No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000588867.1NPC1-2072000No protein-
 
Retained intron
--TSL:5
ENST00000591075.1NPC1-211809No protein-
 
Retained intron
--TSL:4
ENST00000586718.1NPC1-204574No protein-
 
Retained intron
--TSL:3
ENST00000591955.1NPC1-213561No protein-
 
Retained intron
--TSL:4
ENST00000587163.1NPC1-205431No protein-
 
Retained intron
--TSL:2
ENST00000590301.1NPC1-208410No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,760 bps, Translation length: 1,278 residues

MANE

This MANE Select transcript contains ENSP00000269228 and matches to NM_000271.5 and NP_000262.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15118

CCDS

This transcript is a member of the Human CCDS set: CCDS11878

Transcript Support Level (TSL)

TSL:1

Version

ENST00000269228.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.