Human (GRCh38.p14)
Description

partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]

Gene Synonyms

FANCN, FLJ21816

Location
About this transcript

This transcript has 13 exons, is annotated with 23 domains and features, is associated with 26088 variant alleles and maps to 438 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000261584.9PALB2-20140081186aaENSP00000261584.4
 
Protein coding
CCDS32406Q86YC2 NM_024675.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000561514.3PALB2-20248251188aaENSP00000460666.3
 
Protein coding
H3BN63 -GENCODE basicTSL:5
ENST00000697374.1PALB2-2074361891aaENSP00000513284.1
 
Protein coding
CCDS92128H3BN63 -GENCODE basic
ENST00000697379.2PALB2-21241251188aaENSP00000513287.2
 
Protein coding
H3BN63 -GENCODE basic
ENST00000697377.2PALB2-21040581134aaENSP00000513286.2
 
Protein coding
A0A8V8TKZ4 -GENCODE basic
ENST00000697376.1PALB2-2093974776aaENSP00000513285.1
 
Protein coding
A0A8V8TMK8 -GENCODE basic
ENST00000568219.5PALB2-2063963891aaENSP00000454703.2
 
Protein coding
CCDS92128H3BN63 -GENCODE basicTSL:1
ENST00000566069.6PALB2-20438501071aaENSP00000459237.2
 
Protein coding
I3L1Z5 -GENCODE basicTSL:5
ENST00000697383.1PALB2-2161412364aaENSP00000513289.1
 
Protein coding
A0A8V8TLC8 -GENCODE basic
ENST00000697382.1PALB2-2154751749aaENSP00000513288.1
 
Nonsense mediated decay
A0A8V8TMC9 --
ENST00000565038.2PALB2-203163071aaENSP00000459882.2
 
Nonsense mediated decay
I3L2S5 -TSL:3
ENST00000697375.1PALB2-2085177No protein-
 
Protein coding CDS not defined
---
ENST00000697378.1PALB2-2114340No protein-
 
Protein coding CDS not defined
---
ENST00000697381.1PALB2-2142508No protein-
 
Protein coding CDS not defined
---
ENST00000567003.1PALB2-205789No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000697380.1PALB2-2133017No protein-
 
Retained intron
---
ENST00000697384.1PALB2-2172864No protein-
 
Retained intron
---
Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,008 bps, Translation length: 1,186 residues

MANE

This MANE Select transcript contains ENSP00000261584 and matches to NM_024675.4 and NP_078951.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YC2

CCDS

This transcript is a member of the Human CCDS set: CCDS32406

Transcript Support Level (TSL)

TSL:1

Version

ENST00000261584.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.