Human (GRCh38.p14)
Description

cadherin related 23 [Source:HGNC Symbol;Acc:HGNC:13733]

Gene Synonyms

CDHR23, DFNB12, USH1D

Location
About this transcript

This transcript has 70 exons, is annotated with 193 domains and features, is associated with 189109 variant alleles and maps to 1785 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000224721.12CDH23-201111383354aaENSP00000224721.9
 
Protein coding
CCDS86100Q9H251-1 NM_022124.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000442677.4CDH23-20682251211aaENSP00000388894.3
 
Protein coding
B1AVV0 -GENCODE basicTSL:5
ENST00000398809.9CDH23-20548391380aaENSP00000381789.5
 
Protein coding
A0A0A0MS94 -GENCODE basicTSL:5
ENST00000616684.4CDH23-21148141381aaENSP00000482036.2
 
Protein coding
CCDS81472A0A087WYR8 -GENCODE basicTSL:5
ENST00000466757.8CDH23-20844711035aaENSP00000473539.2
 
Protein coding
R4GN92 -TSL:5CDS 5' incomplete
ENST00000398788.4CDH23-20343291114aaENSP00000381768.3
 
Protein coding
CCDS53540Q9H251-7 -GENCODE basicTSL:1
ENST00000619887.4CDH23-21242241079aaENSP00000478374.1
 
Protein coding
CCDS73146Q9H251-9 -GENCODE basicTSL:1
ENST00000299366.11CDH23-20239541061aaENSP00000299366.8
 
Protein coding
CCDS81473Q8N5B3 -GENCODE basicTSL:5
ENST00000461841.7CDH23-2072000530aaENSP00000473454.2
 
Protein coding
CCDS44429Q9H251-5 -GENCODE basicTSL:5
ENST00000646131.1CDH23-2161403396aaENSP00000495098.1
 
Protein coding
A0A2R8Y663 -CDS 5' incomplete
ENST00000470494.5CDH23-209704165aaENSP00000480146.1
 
Protein coding
A0A087WWD9 -TSL:3CDS 5' incomplete
ENST00000644511.1CDH23-215586115aaENSP00000495691.1
 
Protein coding
A0A2R8YEM1 -CDS 3' incomplete
ENST00000642965.1CDH23-213438029aaENSP00000495222.1
 
Nonsense mediated decay
A0A2R8Y6D5 -CDS 5' incomplete
ENST00000647092.1CDH23-21739396aaENSP00000495176.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000643732.1CDH23-2141450No protein-
 
Protein coding CDS not defined
---
ENST00000475158.1CDH23-2104114No protein-
 
Retained intron
--TSL:1
ENST00000398792.3CDH23-2041649No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 70, Coding exons: 69, Transcript length: 11,138 bps, Translation length: 3,354 residues

MANE

This MANE Select transcript contains ENSP00000224721 and matches to NM_022124.6 and NP_071407.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H251

CCDS

This transcript is a member of the Human CCDS set: CCDS86100

Transcript Support Level (TSL)

TSL:5

Version

ENST00000224721.12

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.