Description

Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F6X3S4]

Location
About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 409 variations and maps to 7 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
CTD-2501B8.1-201ENST000004219822271739aaENSP00000387760
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6X3S4 TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CTD-2501B8.1-001ENST000005776474862739aaENSP00000464149
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6X3S4 TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 16 Coding exons: 16 Transcript length: 2,271 bps Translation length: 739 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000421982.5

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays