Description

growth hormone 1 [Source:HGNC Symbol;Acc:HGNC:4261]

Synonyms

GH, GH-N, GHN, hGH-N

Location
About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 171 variations and maps to 47 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GH1-001ENST00000323322803217aaENSP00000312673
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11653B1A4G6 P01241 NM_000515
NP_000506
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
GH1-003ENST00000458650756202aaENSP00000408486
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45760B1A4G7 P01241 NM_022559
NP_072053
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GH1-004ENST00000351388685177aaENSP00000343791
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11654P01241 NM_022560
NP_072054
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GH1-201ENST00000342364537122aaENSP00000339278
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1A4G9 NM_022561
NP_072055
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GH1-202ENST0000061708637630aaENSP00000481276
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1A4H0 NM_022562
NP_072056
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GH1-006ENST00000579711830No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 5 Coding exons: 5 Transcript length: 803 bps Translation length: 217 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11653

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01241

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000323322.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays