Human (GRCh38.p14)
Description

cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557]

Gene Synonyms

CASP, CDP, CDP/CUT, CDP/CUX, CDP1, CLOX, CUT, CUTL1, CUX, CUX/CDP, GOLIM6

About this transcript

This transcript has 23 exons, is associated with 168940 variant alleles and maps to 601 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000292535.12CUX1-201137231505aaENSP00000292535.7
 
Protein coding
CCDS5721P39880-1 NM_181552.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000360264.7CUX1-203137621516aaENSP00000353401.3
 
Protein coding
CCDS56498P39880-3 -GENCODE basicAPPRIS P3TSL:1
ENST00000546411.7CUX1-211137151505aaENSP00000450125.3
 
Protein coding
CCDS5721P39880-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000645010.1CUX1-222136511460aaENSP00000496653.1
 
Protein coding
A0A2R8Y852 -GENCODE basicAPPRIS ALT2
ENST00000646649.1CUX1-223133451358aaENSP00000494610.1
 
Protein coding
A0A2R8YDI1 -GENCODE basicAPPRIS ALT2
ENST00000549414.6CUX1-21344521483aaENSP00000446630.2
 
Protein coding
P39880-2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000550008.6CUX1-21443501449aaENSP00000447373.2
 
Protein coding
P39880-5 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000556210.1CUX1-21540441347aaENSP00000451558.1
 
Protein coding
P39880-6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000437600.9CUX1-2063026676aaENSP00000414091.5
 
Protein coding
CCDS47672Q13948-2 -GENCODE basicTSL:1
ENST00000292538.9CUX1-2022931678aaENSP00000292538.4
 
Protein coding
CCDS5720Q13948-1 -GENCODE basicTSL:1
ENST00000622516.6CUX1-2212929678aaENSP00000484760.2
 
Protein coding
CCDS5720Q13948-1 NM_001913.5MANE Plus ClinicalGENCODE basicTSL:1
ENST00000547394.6CUX1-2122878662aaENSP00000449371.2
 
Protein coding
CCDS56500Q13948-10 -GENCODE basicTSL:2
ENST00000425244.6CUX1-2052776632aaENSP00000409745.2
 
Protein coding
CCDS56499P39880-9 -GENCODE basicTSL:2
ENST00000393824.7CUX1-2042331639aaENSP00000377410.3
 
Protein coding
CCDS59071Q13948-9 -GENCODE basicTSL:2
ENST00000465461.7CUX1-207543117aaENSP00000496739.1
 
Protein coding
A0A2R8Y8D0 -TSL:3CDS 5' incomplete
ENST00000560541.5CUX1-2183176No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000558836.5CUX1-2172965No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000606749.1CUX1-219601No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000558469.5CUX1-216588No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000487284.2CUX1-2091566No protein-
 
Retained intron
--TSL:2
ENST00000497815.5CUX1-210947No protein-
 
Retained intron
--TSL:2
ENST00000485792.1CUX1-208564No protein-
 
Retained intron
--TSL:5
ENST00000607092.1CUX1-220559No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 23, Coding exons: 0, Transcript length: 3,176 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000560541.5

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.