Human (GRCh38.p14)
Description

cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557]

Gene Synonyms

CASP, CDP, CDP/CUT, CDP/CUX, CDP1, CLOX, CUT, CUTL1, CUX, CUX/CDP, GOLIM6

About this transcript

This transcript has 23 exons, is annotated with 13 domains and features, is associated with 212597 variant alleles and maps to 556 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000292535.12CUX1-201137231505aaENSP00000292535.7
 
Protein coding
CCDS5721P39880-1 NM_181552.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000360264.7CUX1-203137621516aaENSP00000353401.3
 
Protein coding
CCDS56498P39880-3 -GENCODE basicAPPRIS P3TSL:1
ENST00000546411.7CUX1-211137151505aaENSP00000450125.3
 
Protein coding
CCDS5721P39880-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000645010.1CUX1-222136511460aaENSP00000496653.1
 
Protein coding
A0A2R8Y852 -GENCODE basicAPPRIS ALT2
ENST00000646649.1CUX1-223133451358aaENSP00000494610.1
 
Protein coding
A0A2R8YDI1 -GENCODE basicAPPRIS ALT2
ENST00000549414.6CUX1-21344521483aaENSP00000446630.2
 
Protein coding
P39880-2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000550008.6CUX1-21443501449aaENSP00000447373.2
 
Protein coding
P39880-5 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000556210.1CUX1-21540441347aaENSP00000451558.1
 
Protein coding
P39880-6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000437600.9CUX1-2063026676aaENSP00000414091.5
 
Protein coding
CCDS47672Q13948-2 -GENCODE basicTSL:1
ENST00000292538.9CUX1-2022931678aaENSP00000292538.4
 
Protein coding
CCDS5720Q13948-1 -GENCODE basicTSL:1
ENST00000622516.6CUX1-2212929678aaENSP00000484760.2
 
Protein coding
CCDS5720Q13948-1 NM_001913.5MANE Plus ClinicalGENCODE basicTSL:1
ENST00000547394.6CUX1-2122878662aaENSP00000449371.2
 
Protein coding
CCDS56500Q13948-10 -GENCODE basicTSL:2
ENST00000425244.6CUX1-2052776632aaENSP00000409745.2
 
Protein coding
CCDS56499P39880-9 -GENCODE basicTSL:2
ENST00000393824.7CUX1-2042331639aaENSP00000377410.3
 
Protein coding
CCDS59071Q13948-9 -GENCODE basicTSL:2
ENST00000465461.7CUX1-207543117aaENSP00000496739.1
 
Protein coding
A0A2R8Y8D0 -TSL:3CDS 5' incomplete
ENST00000560541.5CUX1-2183176No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000558836.5CUX1-2172965No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000606749.1CUX1-219601No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000558469.5CUX1-216588No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000487284.2CUX1-2091566No protein-
 
Retained intron
--TSL:2
ENST00000497815.5CUX1-210947No protein-
 
Retained intron
--TSL:2
ENST00000485792.1CUX1-208564No protein-
 
Retained intron
--TSL:5
ENST00000607092.1CUX1-220559No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 23, Coding exons: 23, Transcript length: 2,931 bps, Translation length: 678 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13948

CCDS

This transcript is a member of the Human CCDS set: CCDS5720

Transcript Support Level (TSL)

TSL:1

Version

ENST00000292538.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.