Description

Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:F8VP50]

About this transcript

This transcript has 8 exons, is annotated with 3 domains and features, is associated with 131 variations and maps to 14 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
RP11-162P23.2-001ENST00000546840784259aaENSP00000450353
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VP50 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 8 Coding exons: 8 Transcript length: 784 bps Translation length: 259 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000546840.2

Type

Putative protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays