Description

metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) [Source:HGNC Symbol;Acc:HGNC:29665]

Synonyms

HCN, LINC00047, MALAT-1, mascRNA, NCRNA00047, NEAT2, PRO1073

Location
Gene

This transcript is a product of gene ENSG00000251562

This gene has 17 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSRefSeqFlags
MALAT1-001ENST000005343368708 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
-NR_002819
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MALAT1-002ENST000005088321519 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-004ENST00000619449794 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-013ENST00000618132725 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-016ENST00000618227593 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-017ENST00000616691587 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-015ENST00000610851584 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-012ENST00000616527572 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-007ENST00000544868480 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-009ENST00000618925424 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-006ENST00000617791394 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-008ENST00000610481353 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-005ENST00000620902352 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-011ENST00000620465333 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-003ENST00000617489318 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-010ENST00000612781234 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
MALAT1-014ENST00000613376132 bp No protein product
 
LincRNALarge intergenic non-coding RNAs, usually associated with open chromatin signatures such as histone modification sites.
--
Statistics

Exons: 1 Coding exons: 0 Transcript length: 8,708 bps

Ensembl version

ENST00000534336.1

Type

Known lincRNA

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays