Description

vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518]

Gene

This transcript is a product of gene ENSG00000236014

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDSGENCODE basic
VPS52-001ENST000004286082960ENSP00000406988723Protein codingGenes and/or transcript that contains an open reading frame (ORF).-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
VPS52-007ENST000004767253331ENSP0000043431988Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
VPS52-002ENST000004846492602No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
VPS52-004ENST000004940641060No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-005ENST00000485847925No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-011ENST00000473365878No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-010ENST00000487764743No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-006ENST00000475984505No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-003ENST00000484169786No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS52-009ENST00000466566547No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS52-008ENST00000463641453No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 20 Coding exons: 20 Transcript length: 2,960 bps Translation length: 723 residues

Ensembl version

ENST00000428608.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000276250 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays