Description

major histocompatibility complex, class I, C [Source:HGNC Symbol;Acc:HGNC:4933]

Synonyms

D6S204, HLA-JY3, PSORS1

Gene

This transcript is a product of gene ENSG00000233841

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
HLA-C-001ENST000004248321580 bp366 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6Q0P2 A6Q0R3 B1PQ27
C0KJW1 C0KJY4 C0KK02
C5IZX3 C6JSX5 C6JSX6
C6K4L0 C6K4Q8 C6K4R1
D5L9E4 D6MKT8 D6MKU0
D6MKU4 D6MKU5 D6MKU8
D6MKU9 D6MKX5 D6ML75
D6ML76 D6ML82 D6ML86
D7NNV8 D7NNX9 D7NNY5
D7NNY6 D7NNY9 D7NNZ6
D7NNZ8 D7NP06 D7NP07
D7NP08 D7NP10 D7NP17
D7NQX8 D7NR11 E0WBQ0
E0YTM1 E0YTM2 E0YTN0
E0YTN8 E3Q0Y6 E3Q1I7
E3SWL5 E5DCP3 F1CCI7
F2X638 F4YU82 F5A4J5
F6KS19 G0KXK6 G0WVC8
G0ZDV5 G1EQF6 G1EQJ3
G3D6F0 H2BDQ3 H2DMK2
I6SJ89 I7JB69 J7K1C3
J7K3I4 J9PVD1 K7P579
K7P5M8 K7P5Q4 K7P5Q8
M9P909 M9P9J7 M9P9Y4
O19617 Q0PQ42 Q0ZP95
Q1WAA9 Q30203 Q30204
Q546A4 Q860R7 Q8HWG1
Q8HWT1 Q9MY32 Q9TNT2
Q9TPU5 R4L8Y9 R9RH39
S4T6J9 S4TZI0 U5IRC6
U5YC31 U5YC87 U5YD47
U5YES2 U5YEX4 U5YEY1
U5YF35 V5LKW4 V5LKX4
V5NQX7 V5NWD5 V5NWG6
V5NXV7 W0NQ25 W0NWX1
NM_001243042
NP_001229971
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-003ENST000004235091554 bp372 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6Q0P2 B1PQ27 C0KJW1
C0KJY4 C0KK02 C5IZX3
C6JSX5 C6JSX6 C6K4L0
C6K4Q8 C6K4R1 D5L9E4
D6MKT8 D6MKU0 D6MKU4
D6MKU5 D6MKU8 D6MKU9
D6MKX5 D6ML75 D6ML76
D6ML82 D6ML86 D7NNV8
D7NNX9 D7NNY5 D7NNY6
D7NNY9 D7NNZ6 D7NNZ8
D7NP06 D7NP07 D7NP08
D7NP10 D7NP17 D7NQX8
D7NR11 E0WBQ0 E0YTM1
E0YTM2 E0YTN0 E0YTN8
E3Q0Y6 E3Q1I7 E3SWL5
E5DCP3 F1CCI7 F2X638
F4YU82 F5A4J5 F6KS19
G0KXK6 G0WVC8 G0ZDV5
G1EQF6 G1EQJ3 G3D6F0
H2BDQ3 H2DMK2 I6SJ89
I7JB69 J7K1C3 J7K3I4
J9PVD1 K7P579 K7P5M8
K7P5Q4 K7P5Q8 M9P909
M9P9J7 M9P9Y4 Q0PQ42
Q0ZP95 Q1WAA9 Q30203
Q30204 Q546A4 Q860R7
Q8HWT1 Q9MY32 Q9TNT2
Q9TPU5 R4L8Y9 R9RH39
S4T6J9 S4TZI0 U5IRC6
U5YC31 U5YC87 U5YD47
U5YES2 U5YEX4 U5YEY1
U5YF35 V5LKW4 V5LKX4
V5NWD5 V5NWG6 V5NXV7
W0NQ25 W0NWX1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-004ENST000004309401532 bp397 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6Q0P2 B1PQ27 C0KJW1
C0KJY4 C0KK02 C5IZX3
C6JSX5 C6JSX6 C6K4L0
C6K4Q8 C6K4R1 D5L9E4
D6MKT8 D6MKU0 D6MKU4
D6MKU5 D6MKU8 D6MKU9
D6MKX5 D6ML75 D6ML76
D6ML82 D6ML86 D7NNV8
D7NNX9 D7NNY5 D7NNY6
D7NNY9 D7NNZ6 D7NNZ8
D7NP06 D7NP07 D7NP08
D7NP10 D7NP17 D7NQX8
D7NR11 E0WBQ0 E0YTM1
E0YTM2 E0YTN0 E0YTN8
E3Q0Y6 E3Q1I7 E3SWL5
E5DCP3 F1CCI7 F2X638
F4YU82 F5A4J5 F6KS19
G0KXK6 G0WVC8 G0ZDV5
G1EQF6 G1EQJ3 G3D6F0
H2BDQ3 H2DMK2 I6SJ89
I7JB69 J7K1C3 J7K3I4
J9PVD1 K7P579 K7P5M8
K7P5Q4 K7P5Q8 M9P909
M9P9J7 M9P9Y4 Q0PQ42
Q0ZP95 Q1WAA9 Q30203
Q30204 Q546A4 Q860R7
Q8HWT1 Q9MY32 Q9TNT2
Q9TPU5 R4L8Y9 R9RH39
S4T6J9 S4TZI0 U5IRC6
U5YC31 U5YC87 U5YD47
U5YES2 U5YEX4 U5YEY1
U5YF35 V5LKW4 V5LKX4
V5NWD5 V5NWG6 V5NXV7
W0NQ25 W0NWX1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-002ENST000004227261452 bp368 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6Q0P2 B1PQ27 C0KJW1
C0KJY4 C0KK02 C5IZX3
C6JSX5 C6JSX6 C6K4L0
C6K4Q8 C6K4R1 D5L9E4
D6MKT8 D6MKU0 D6MKU4
D6MKU5 D6MKU8 D6MKU9
D6MKX5 D6ML75 D6ML76
D6ML82 D6ML86 D7NNV8
D7NNX9 D7NNY5 D7NNY6
D7NNY9 D7NNZ6 D7NNZ8
D7NP06 D7NP07 D7NP08
D7NP10 D7NP17 D7NQX8
D7NR11 E0WBQ0 E0YTM1
E0YTM2 E0YTN0 E0YTN8
E3Q0Y6 E3Q1I7 E3SWL5
E5DCP3 F1CCI7 F2X638
F4YU82 F5A4J5 F6KS19
G0KXK6 G0WVC8 G0ZDV5
G1EQF6 G1EQJ3 G3D6F0
H2BDQ3 H2DMK2 I6SJ89
I7JB69 J7K1C3 J7K3I4
J9PVD1 K7P579 K7P5M8
K7P5Q4 K7P5Q8 M9P909
M9P9J7 M9P9Y4 Q0PQ42
Q0ZP95 Q1WAA9 Q30203
Q30204 Q546A4 Q860R7
Q8HWT1 Q9MY32 Q9TNT2
Q9TPU5 R4L8Y9 R9RH39
S4T6J9 S4TZI0 U5IRC6
U5YC31 U5YC87 U5YD47
U5YES2 U5YEX4 U5YEY1
U5YF35 V5LKW4 V5LKX4
V5NWD5 V5NWG6 V5NXV7
W0NQ25 W0NWX1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-007ENST00000457806782 bp261 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6Q0P2 C0KJW1 C0KJY4
C0KK02 C5IZX3 C6JSX5
C6JSX6 C6K4L0 C6K4Q8
C6K4R1 D5L9E4 D6MKT8
D6MKU0 D6MKU4 D6MKU5
D6MKU8 D6MKU9 D6MKX5
D6ML75 D6ML76 D6ML82
D6ML86 D7NNV8 D7NNX9
D7NNY5 D7NNY6 D7NNY9
D7NNZ6 D7NNZ8 D7NP06
D7NP07 D7NP08 D7NP10
D7NP17 D7NQX8 D7NR11
E0WBQ0 E0YTM1 E0YTM2
E0YTN0 E0YTN8 E3Q0Y6
E3SWL5 E5DCP3 F1CCI7
F2X638 F4YU82 F6KS19
G0KXK6 G0WVC8 G0ZDV5
G1EQF6 G1EQJ3 G3D6F0
H2BDQ3 H2DMK2 I6SJ89
J7K1C3 J7K3I4 J9PVD1
K7P579 K7P5M8 K7P5Q4
K7P5Q8 M9P909 M9P9J7
M9P9Y4 Q0PQ42 Q0ZP95
Q1WAA9 Q30203 Q30204
Q546A4 Q860R7 Q8HWT1
Q9TPU5 R4L8Y9 S4T6J9
S4TZI0 U5IRC6 U5YC31
U5YC87 U5YD47 U5YES2
U5YEX4 U5YEY1 U5YF35
V5LKW4 V5LKX4 V5NWD5
V5NWG6 V5NXV7 W0NQ25
W0NWX1
-CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
HLA-C-204ENST00000621261147 bp49 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-006ENST000004762481538 bp131 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E3Q0Y6 Q30203 Q9MY32
U5YC87 U5YES2 U5YEX4
U5YEY1 V5LKW4 V5LKX4
-
HLA-C-009ENST00000464914966 bp224 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A6Q0P2 C0KJW1 C0KJY4
C0KK02 C5IZX3 C6JSX5
C6JSX6 C6K4L0 C6K4Q8
C6K4R1 D5L9E4 D6MKT8
D6MKU0 D6MKU4 D6MKU5
D6MKU8 D6MKU9 D6MKX5
D6ML75 D6ML76 D6ML82
D6ML86 D7NNV8 D7NNX9
D7NNY5 D7NNY6 D7NNY9
D7NNZ6 D7NNZ8 D7NP06
D7NP07 D7NP08 D7NP10
D7NP17 D7NQX8 D7NR11
E0WBQ0 E0YTM1 E0YTM2
E0YTN0 E0YTN8 E3Q0Y6
E3SWL5 E5DCP3 F1CCI7
F2X638 F4YU82 F6KS19
G0KXK6 G0WVC8 G0ZDV5
G1EQF6 G1EQJ3 G3D6F0
H2BDQ3 H2DMK2 I6SJ89
J7K1C3 J7K3I4 J9PVD1
K7P579 K7P5M8 K7P5Q4
K7P5Q8 M9P909 M9P9J7
M9P9Y4 Q0PQ42 Q0ZP95
Q1WAA9 Q30203 Q30204
Q546A4 Q860R7 Q8HWT1
Q9MY32 Q9TPU5 R4L8Y9
S4T6J9 S4TZI0 U5IRC6
U5YC31 U5YC87 U5YD47
U5YES2 U5YEX4 U5YEY1
U5YF35 V5LKW4 V5LKX4
V5NWD5 V5NWG6 V5NXV7
W0NQ25 W0NWX1
-
HLA-C-005ENST000004964191880 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-010ENST000004941581279 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-008ENST000004628511073 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-012ENST00000497204862 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-011ENST00000486266754 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 8 Coding exons: 8 Transcript length: 1,580 bps Translation length: 366 residues

Ensembl version

ENST00000424832.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays