Description

major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:4944]

Gene

This transcript is a product of gene ENSG00000233209

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
HLA-DQB1-002ENST000003990741789ENSP00000382025269Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-003ENST000004229501734ENSP00000414079261Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-001ENST000004161921642ENSP00000410107261Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-004ENST000004348861484ENSP00000393979224Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-007ENST000004307901219ENSP00000388447134Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-006ENST00000432856484ENSP00000394159144Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
HLA-DQB1-008ENST000004908621423ENSP00000433300136Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
HLA-DQB1-009ENST00000486521428No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-005ENST000004795704631No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 5 Coding exons: 5 Transcript length: 1,642 bps Translation length: 261 residues

Ensembl version

ENST00000416192.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000310424 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays