Description

major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]

Synonyms

AS

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
HLA-B-001ENST000004508711605362 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0MSS3 A6H579 A9XFY0
B0BK83 B9VWB1 C7E562
C9E1H1 C9WCR5 D3U3K6
D3U3L7 D3U7S4 D4II60
D5FI08 D5FWB4 D5FWB8
D5FZJ3 D5FZU7 D5FZU8
D5FZU9 D9J307 D9UB27
E2D5Q5 F2X5U7 F2XI37
F4NBQ0 F4NBQ1 F4NBQ2
F4YAL4 F6KRT1 F6KRU2
F8R162 F8R173 F8R8I9
F8RHE2 G0KXG0 G0WVA9
G0Z8D5 G0ZDU8 G1EML2
G1EMN7 G1ENJ7 G1ENK2
G1ENK3 G1ENK5 G1EPV4
G1EPV9 G1EPW6 G9DBG8
G9HW35 G9HW42 G9HW47
H2BEA8 H9BQ87 H9C5G7
I2B2Z6 I6NN74 I6NXF2
I6RGX6 I7JWS9 J9PVN9
J9ZYA5 K7P5Q0 K9LDK9
M1F375 M1F5Q3 M1FXU8
M1FYE9 M4MD33 M9PAM6
O19539 O19541 O19543
O19551 O78122 O78174
P30464 P30483 P30484
P30488 P30490 Q0GF39
Q29843 Q30210 Q5F311
Q5K2Q6 Q5QR28 Q5QR32
Q5QR35 Q5QR37 Q5QR39
Q5QR40 Q5QR41 Q5QR44
Q5QR47 Q5QR52 Q5QR53
Q5QR54 Q5QR55 Q5QR56
Q5QR79 Q5QR80 Q5QR81
Q5QR82 Q6ZXT6 Q709M5
Q70HJ6 Q70T16 Q7YNX2
Q7YP17 Q7YP18 Q7YQ96
Q861C4 Q861D4 Q861D6
Q861D8 Q861D9 Q861E0
Q861E1 Q861E2 Q861E3
Q861E4 Q8HWQ3 Q8MGY8
Q8SP60 Q95HM5 Q9GIX5
Q9TPM4 Q9TQJ4 R4I4C5
R4KZR0 R9RFL0 T1R353
U6BN32 U6EFT7 V5JA67
V5L684
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-B-006ENST000004257981154241 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B9VWB1 Q29843 Q5F311
Q5QR28 Q5QR32 Q5QR35
Q5QR37 Q5QR39 Q5QR40
Q5QR41 Q5QR44 Q5QR47
Q5QR52 Q5QR53 Q5QR54
Q5QR55 Q5QR56 Q6ZXT6
Q709M5 Q70HJ6 Q7YNX2
Q7YP17 Q861D4 Q861D6
Q861D8 Q861D9 Q861E0
Q861E1 Q861E2 Q861E3
Q861E4 Q8HWQ3 Q8MGY8
CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-003ENST00000437866864246 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B0BK83 C7E562 C9E1H1
C9WCR5 D3U3K6 D3U3L7
D3U7S4 D5FI08 D5FWB4
D5FWB8 D5FZJ3 D5FZU7
D5FZU8 D5FZU9 E2D5Q5
F2X5U7 F6KRT1 F6KRU2
F8R162 F8R173 F8R8I9
F8RHE2 G0KXG0 G0WVA9
G0Z8D5 G0ZDU8 G1EML2
G1EMN7 G1ENJ7 G1ENK2
G1ENK3 G1ENK5 G1EPV4
G1EPV9 G1EPW6 G9HW35
G9HW42 G9HW47 H2BEA8
H9BQ87 H9C5G7 I2B2Z6
I6NN74 I6NXF2 I6RGX6
I7JWS9 J9PVN9 J9ZYA5
K7P5Q0 K9LDK9 M1F375
M1F5Q3 M1FXU8 M1FYE9
M4MD33 M9PAM6 O19539
O19541 O19543 O19551
O78122 O78174 Q5K2Q6
Q70T16 Q7YP18 Q7YQ96
Q861C4 Q8SP60 Q9GIX5
Q9TPM4 Q9TQJ4 R4I4C5
R4KZR0 T1R353 U6EFT7
V5JA67 V5L684
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-004ENST000004716391008224 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A9XFY0 B0BK83 C7E562
C9E1H1 C9WCR5 D3U3K6
D3U3L7 D3U7S4 D5FI08
D5FWB4 D5FWB8 D5FZJ3
D5FZU7 D5FZU8 D5FZU9
E2D5Q5 F2X5U7 F6KRT1
F6KRU2 F8R162 F8R173
F8R8I9 F8RHE2 G0KXG0
G0WVA9 G0Z8D5 G0ZDU8
G1EML2 G1EMN7 G1ENJ7
G1ENK2 G1ENK3 G1ENK5
G1EPV4 G1EPV9 G1EPW6
G9HW35 G9HW42 G9HW47
H2BEA8 H9BQ87 H9C5G7
I2B2Z6 I6NN74 I6NXF2
I6RGX6 I7JWS9 J9PVN9
J9ZYA5 K7P5Q0 K9LDK9
M1F375 M1F5Q3 M1FXU8
M1FYE9 M4MD33 M9PAM6
O19539 O19541 O19543
O19551 O78122 O78174
Q5K2Q6 Q5QR79 Q5QR80
Q5QR81 Q5QR82 Q70T16
Q7YP18 Q7YQ96 Q861C4
Q8SP60 Q95HM5 Q9GIX5
Q9TPM4 Q9TQJ4 R4I4C5
R4KZR0 T1R353 U6EFT7
V5JA67 V5L684
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-002ENST000004698831087No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-007ENST00000494335917No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-008ENST00000488641753No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-005ENST00000462100588No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 4 Transcript length: 1,008 bps Translation length: 224 residues

Transcript Support Level

NA

Ensembl version

ENST00000471639.3

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays