Transcript: ENST00000444296.6 HLA-DQA1-232

Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Gene Synonyms

CELIAC1, HLA-DQA

Location

About this transcript

This transcript has 5 exons, is annotated with 53 domains and features and maps to 601 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000418023.5	HLA-DQA1-231	1217	255aa	ENSP00000387892.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		L8E864 P01909	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000444296.6	HLA-DQA1-232	922	255aa	ENSP00000413237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		L8E864 P01909	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 922 bps, Translation length: 255 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01909

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000444296.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.