Description

major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:HGNC:4944]

Synonyms

CELIAC1, HLA-DQB, IDDM1

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features and is associated with 333 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-DQB1-002ENST000003990651788269aaENSP00000382018
 
Protein coding
---TSL:NAGENCODE basic
HLA-DQB1-003ENST000004130891734261aaENSP00000396539
 
Protein coding
-P01920 S6B230 -TSL:NAGENCODE basic
HLA-DQB1-001ENST000003990881642261aaENSP00000382038
 
Protein coding
-P01920 S6B230 NM_001243962
NP_001230891
TSL:NAGENCODE basic
HLA-DQB1-004ENST000004245301485224aaENSP00000411566
 
Protein coding
---TSL:NAGENCODE basic
HLA-DQB1-007ENST000004339361219134aaENSP00000414555
 
Protein coding
---TSL:NAGENCODE basic
HLA-DQB1-006ENST00000457445484144aaENSP00000416744
 
Protein coding
---CDS 3' incompleteTSL:NA
HLA-DQB1-008ENST000004807491423136aaENSP00000435701
 
Nonsense mediated decay
---TSL:NA
HLA-DQB1-009ENST00000476430428No protein-
 
Processed transcript
---TSL:NA
HLA-DQB1-005ENST000004727084732No protein-
 
Retained intron
---TSL:NA
Statistics

Exons: 6 Coding exons: 6 Transcript length: 1,788 bps Translation length: 269 residues

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000399065.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays