Description

major histocompatibility complex, class II, DQ beta 1 [Source:HGNC Symbol;Acc:4944]

Gene

This transcript is a product of gene ENSG00000231286

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
HLA-DQB1-002ENST000003990651788ENSP00000382018269Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-003ENST000004130891734ENSP00000396539261Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-001ENST000003990881642ENSP00000382038261Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-004ENST000004245301485ENSP00000411566224Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-007ENST000004339361219ENSP00000414555134Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-006ENST00000457445484ENSP00000416744144Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
HLA-DQB1-008ENST000004807491423ENSP00000435701136Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
HLA-DQB1-009ENST00000476430428No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
HLA-DQB1-005ENST000004727084732No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 6 Coding exons: 5 Transcript length: 1,734 bps Translation length: 261 residues

Ensembl version

ENST00000413089.1

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000312479 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays