Description

major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]

Synonyms

AS

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features and is associated with 516 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-B-001ENST000004213491589362aaENSP00000405365
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D5H3J5 P30481 NM_005514
NP_005505
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-B-006ENST000004372651154241aaENSP00000398100
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
HLA-B-003ENST00000445610738246aaENSP00000396397
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
HLA-B-004ENST000004984841008224aaENSP00000435083
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---
HLA-B-002ENST000004638321085No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-B-007ENST00000463600917No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-B-008ENST00000491669753No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-B-005ENST00000475902588No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 6 Coding exons: 4 Transcript length: 1,008 bps Translation length: 224 residues

Ensembl version

ENST00000498484.4

Type

Known nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays