Description

major histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]

Synonyms

AS

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
HLA-B-001ENST000004213491589362 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A023T5V9 A8KNJ4 B3W6N3
C7E565 C8CAY1 C9WCW5
C9WEP5 D1G104 D2DL02
D3JTA5 D3U4A4 D3XDF2
D5FHX4 D5FHY3 D5FHZ4
D5FZL0 D5FZL7 D5H3J5
D7NPN8 D7R0T8 D9U3H2
E0X600 E0YTL0 E2D5R1
E2GJJ4 E2GJJ5 E2GJK4
E2GJL7 E2GJM1 E3SG96
E3SGA2 E7BYA8 E7EDN6
E9LY43 E9LY52 E9LY54
E9LY55 E9LY57 F2VNK6
F2VNM2 F2X5W7 F4YU37
F4YU41 F4YZT7 F6KRS6
F6KRU3 F8R147 F8R164
F8R166 F8R185 G0LXY9
G0WVB8 G0WVB9 G0X8R9
G0ZDT3 G0ZDU1 G0ZDU4
G1ENG0 G1EPI8 G3D6J0
H6A2E1 I1W1M6 I2GUK4
I6NWI4 I7DB68 L7PEX1
L7YDJ5 M1FUS0 P30481
Q000J7 Q29843 Q29923
Q58P05 Q5QR31 Q5QR33
Q5QR34 Q5QR45 Q5QR70
Q5QR71 Q5QR74 Q5QR78
Q66WL2 Q710M7 Q710M8
Q7YNW9 Q861E5 Q8HWR2
Q8HWR3 Q8HWR4 Q8HWR8
Q95HA7 Q95IF2 Q9BD04
Q9GIL2 Q9GIZ8 Q9MY59
Q9MY96 Q9UIM8 R4I3H0
R4I4E4 R5AJZ3 U5IQH0
V5J9Z8 V5NWC7 W0HHM6
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-B-006ENST000004372651154241 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q29843 Q5QR31 Q5QR33
Q5QR34 Q5QR45 Q710M7
Q710M8 Q861E5 Q95HA7
CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-003ENST00000445610738246 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A023T5V9 C7E565 C8CAY1
C9WCW5 C9WEP5 D1G104
D2DL02 D3JTA5 D3U4A4
D3XDF2 D5FHX4 D5FHY3
D5FHZ4 D5FZL0 D5FZL7
D7NPN8 D7R0T8 D9U3H2
E0X600 E0YTL0 E2D5R1
E2GJJ4 E2GJJ5 E2GJK4
E2GJL7 E2GJM1 E3SG96
E3SGA2 E7BYA8 E7EDN6
E9LY43 E9LY52 E9LY54
E9LY55 E9LY57 F2VNK6
F2VNM2 F2X5W7 F4YU37
F4YU41 F4YZT7 F6KRS6
F6KRU3 F8R147 F8R164
F8R166 F8R185 G0LXY9
G0WVB8 G0WVB9 G0X8R9
G0ZDT3 G0ZDU1 G0ZDU4
G1ENG0 G1EPI8 G3D6J0
H6A2E1 I1W1M6 I6NWI4
I7DB68 L7PEX1 L7YDJ5
M1FUS0 Q000J7 Q7YNW9
Q95IF2 Q9MY59 Q9MY96
Q9UIM8 R4I3H0 R4I4E4
U5IQH0 V5J9Z8 V5NWC7
W0HHM6
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-004ENST000004984841008224 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-A0A023T5V9 A8KNJ4 C7E565
C8CAY1 C9WCW5 C9WEP5
D1G104 D2DL02 D3JTA5
D3U4A4 D3XDF2 D5FHX4
D5FHY3 D5FHZ4 D5FZL0
D5FZL7 D7NPN8 D7R0T8
D9U3H2 E0X600 E0YTL0
E2D5R1 E2GJJ4 E2GJJ5
E2GJK4 E2GJL7 E2GJM1
E3SG96 E3SGA2 E7BYA8
E7EDN6 E9LY43 E9LY52
E9LY54 E9LY55 E9LY57
F2VNK6 F2VNM2 F2X5W7
F4YU37 F4YU41 F4YZT7
F6KRS6 F6KRU3 F8R147
F8R164 F8R166 F8R185
G0LXY9 G0WVB8 G0WVB9
G0X8R9 G0ZDT3 G0ZDU1
G0ZDU4 G1ENG0 G1EPI8
G3D6J0 H6A2E1 I1W1M6
I6NWI4 I7DB68 L7PEX1
L7YDJ5 M1FUS0 Q000J7
Q58P05 Q5QR70 Q5QR71
Q5QR74 Q5QR78 Q66WL2
Q7YNW9 Q8HWR2 Q8HWR3
Q8HWR4 Q8HWR8 Q95IF2
Q9BD04 Q9GIL2 Q9GIZ8
Q9MY59 Q9MY96 Q9UIM8
R4I3H0 R4I4E4 U5IQH0
V5J9Z8 V5NWC7 W0HHM6
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-002ENST000004638321085No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-007ENST00000463600917No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-008ENST00000491669753No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HLA-B-005ENST00000475902588No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 4 Transcript length: 1,008 bps Translation length: 224 residues

Transcript Support Level

NA

Ensembl version

ENST00000498484.3

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays