Description

synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:11497]

Synonyms

KIAA1938, RASA5, SYNGAP

About this transcript

This transcript has 17 exons, is annotated with 27 domains and features and is associated with 130 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SYNGAP1-001ENST0000045568759161343aaENSP00000414259
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 NM_006772
NP_006763
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-004ENST0000039507146011299aaENSP00000378509
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-003ENST0000041475343391284aaENSP00000407995
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-006ENST000003558181461487aaENSP00000348072
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
SYNGAP1-002ENST000004614592061No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SYNGAP1-007ENST00000484671479No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SYNGAP1-005ENST00000490978260No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SYNGAP1-008ENST00000481000394No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 17 Coding exons: 17 Transcript length: 4,339 bps Translation length: 1,284 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PV0

Ensembl version

ENST00000414753.5

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays