Description

synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:11497]

Synonyms

KIAA1938, RASA5, SYNGAP

Gene

This transcript is a product of gene ENSG00000227460

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
SYNGAP1-001ENST000004556875916 bp1343 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-004ENST000003950714601 bp1299 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-003ENST000004147534339 bp1284 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-006ENST000003558181461 bp487 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
SYNGAP1-002ENST000004614592061 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
SYNGAP1-007ENST00000484671479 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
SYNGAP1-005ENST00000490978260 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
SYNGAP1-008ENST00000481000394 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 19 Coding exons: 19 Transcript length: 5,916 bps Translation length: 1,343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PV0

Ensembl version

ENST00000455687.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays