Description

synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:11497]

Synonyms

KIAA1938, RASA5, SYNGAP

About this transcript

This transcript has 19 exons, is annotated with 26 domains and features and is associated with 75 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SYNGAP1-001ENST0000045568759161343aaENSP00000414259
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 NM_006772
NP_006763
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-004ENST0000039507146011299aaENSP00000378509
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-003ENST0000041475343391284aaENSP00000407995
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q96PV0 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SYNGAP1-006ENST000003558181461487aaENSP00000348072
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
SYNGAP1-002ENST000004614592061No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SYNGAP1-007ENST00000484671479No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SYNGAP1-005ENST00000490978260No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SYNGAP1-008ENST00000481000394No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 19 Coding exons: 19 Transcript length: 5,916 bps Translation length: 1,343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PV0

Ensembl version

ENST00000455687.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays