Description

zinc finger protein 469 [Source:HGNC Symbol;Acc:HGNC:23216]

Synonyms

KIAA1858

Location
About this transcript

This transcript has 2 exons, is annotated with 55 domains and features, is associated with 816 variations and maps to 41 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ZNF469-201ENST00000437464132033925aaENSP00000402343
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45544Q96JG9 NM_001127464
NP_001120936
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P2

PRINCIPAL2 - APPRIS candidate principal isoform (CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

ZNF469-001ENST00000565624132793953aaENSP00000456500
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BS19 -TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 2 Coding exons: 2 Transcript length: 13,203 bps Translation length: 3,925 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45544

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JG9

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000437464.1

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays