Description

vacuolar protein sorting 52 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:10518]

Gene

This transcript is a product of gene ENSG00000224455

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDSGENCODE basic
VPS52-001ENST000004438602960ENSP00000404016723Protein codingGenes and/or transcript that contains an open reading frame (ORF).-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
VPS52-007ENST000004783923338ENSP0000043446988Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
VPS52-002ENST000004833512602No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
VPS52-004ENST000004876111060No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-005ENST00000462911925No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-011ENST00000494451878No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-010ENST00000467000743No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-006ENST00000485137505No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
VPS52-003ENST00000463636786No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS52-009ENST00000488248547No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS52-008ENST00000484059453No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 20 Coding exons: 20 Transcript length: 2,960 bps Translation length: 723 residues

Ensembl version

ENST00000443860.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000312558 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays