Human (GRCh38.p14)
Description

linker for activation of T cells [Source:HGNC Symbol;Acc:HGNC:18874]

Gene Synonyms

LAT1

Location
About this transcript

This transcript has 12 exons, is annotated with 18 domains and features, is associated with 2585 variant alleles and maps to 470 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000395456.7LAT-2021671233aaENSP00000378841.3
 
Protein coding
CCDS32425O43561-2 NM_001014987.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000360872.9LAT-2011459262aaENSP00000354119.5
 
Protein coding
CCDS10647O43561-1 -GENCODE basicTSL:2
ENST00000395461.7LAT-2031448269aaENSP00000378845.3
 
Protein coding
CCDS53999O43561-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000454369.6LAT-2041262232aaENSP00000398793.2
 
Protein coding
CCDS45455O43561-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000564277.5LAT-208921232aaENSP00000457036.1
 
Protein coding
CCDS45455O43561-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000566177.5LAT-210786261aaENSP00000456761.1
 
Protein coding
O43561-5 -GENCODE basicTSL:1
ENST00000570232.2LAT-215707166aaENSP00000455728.1
 
Protein coding
H3BQD8 -TSL:5CDS 5' incomplete
ENST00000562701.5LAT-20681685aaENSP00000454793.1
 
Nonsense mediated decay
C7C5T5 -TSL:1
ENST00000563964.5LAT-207710No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000564447.5LAT-2092443No protein-
 
Retained intron
--TSL:2
ENST00000697038.1LAT-2161527No protein-
 
Retained intron
---
ENST00000566270.5LAT-211946No protein-
 
Retained intron
--TSL:1
ENST00000568899.5LAT-214701No protein-
 
Retained intron
--TSL:2
ENST00000566415.1LAT-212617No protein-
 
Retained intron
--TSL:2
ENST00000562472.5LAT-205615No protein-
 
Retained intron
--TSL:2
ENST00000568440.1LAT-213419No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,262 bps, Translation length: 232 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43561

CCDS

This transcript is a member of the Human CCDS set: CCDS45455

Transcript Support Level (TSL)

TSL:5

Version

ENST00000454369.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.