Human (GRCh38.p14)
Description

linker for activation of T cells [Source:HGNC Symbol;Acc:HGNC:18874]

Gene Synonyms

LAT1

Location
About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 2745 variant alleles and maps to 493 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000395456.7LAT-2021671233aaENSP00000378841.3
 
Protein coding
CCDS32425O43561-2 NM_001014987.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000360872.9LAT-2011459262aaENSP00000354119.5
 
Protein coding
CCDS10647O43561-1 -GENCODE basicTSL:2
ENST00000395461.7LAT-2031448269aaENSP00000378845.3
 
Protein coding
CCDS53999O43561-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000454369.6LAT-2041262232aaENSP00000398793.2
 
Protein coding
CCDS45455O43561-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000564277.5LAT-208921232aaENSP00000457036.1
 
Protein coding
CCDS45455O43561-4 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000566177.5LAT-210786261aaENSP00000456761.1
 
Protein coding
O43561-5 -GENCODE basicTSL:1
ENST00000570232.2LAT-215707166aaENSP00000455728.1
 
Protein coding
H3BQD8 -TSL:5CDS 5' incomplete
ENST00000562701.5LAT-20681685aaENSP00000454793.1
 
Nonsense mediated decay
C7C5T5 -TSL:1
ENST00000563964.5LAT-207710No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000564447.5LAT-2092443No protein-
 
Retained intron
--TSL:2
ENST00000697038.1LAT-2161527No protein-
 
Retained intron
---
ENST00000566270.5LAT-211946No protein-
 
Retained intron
--TSL:1
ENST00000568899.5LAT-214701No protein-
 
Retained intron
--TSL:2
ENST00000566415.1LAT-212617No protein-
 
Retained intron
--TSL:2
ENST00000562472.5LAT-205615No protein-
 
Retained intron
--TSL:2
ENST00000568440.1LAT-213419No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,671 bps, Translation length: 233 residues

MANE

This MANE Select transcript contains ENSP00000378841 and matches to NM_001014987.2 and NP_001014987.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43561

CCDS

This transcript is a member of the Human CCDS set: CCDS32425

Transcript Support Level (TSL)

TSL:1

Version

ENST00000395456.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.