Description

major histocompatibility complex, class I, C [Source:HGNC Symbol;Acc:HGNC:4933]

Synonyms

D6S204, HLA-JY3, PSORS1

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features and is associated with 557 variations.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-C-001ENST000004003411599366aaENSP00000383195
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P30504 P30505 Q07000
Q5RIP0 Q95604 Q9TNN7
NM_002117
NP_002108
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-003ENST000003834871552372aaENSP00000372979
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-004ENST000003834831530397aaENSP00000372975
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2BF26 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-002ENST000004586681447368aaENSP00000403541
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-C-007ENST00000449884782261aaENSP00000411867
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
HLA-C-006ENST000004853211536131aaENSP00000431141
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---
HLA-C-009ENST00000461937966224aaENSP00000436842
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---
HLA-C-005ENST000004614701873No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-010ENST000004867291276No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-008ENST000004701761073No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-012ENST00000464623858No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HLA-C-011ENST00000488240752No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 8 Coding exons: 8 Transcript length: 1,599 bps Translation length: 366 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P30504, P30505, Q07000, Q95604, Q9TNN7

Ensembl version

ENST00000400341.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays