Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Synonyms

CELIAC1, HLA-DQA

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 78 variations and maps to 1 oligo probe.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-DQA1-001ENST000003832511522254aaENSP00000372738
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P01909 Q5Y7D2 NM_002122
NP_002113
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-005ENST000003996781237254aaENSP00000382586
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P01909 Q5Y7D2 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-004ENST000003996751103254aaENSP00000382583
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P01909 Q5Y7D2 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-201ENST000005480141079254aaENSP00000447970
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-P01909 Q5Y7D2 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 5 Coding exons: 4 Transcript length: 1,522 bps Translation length: 254 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01909

Ensembl version

ENST00000383251.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays