Transcript: ENST00000376883.2 ZFP57-201

Description

ZFP57 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:18791]

Gene Synonyms

BA145L22, BA145L22.2, C6ORF40, ZNF698

Location

Chromosome 6: 29,672,483-29,681,152 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 41 domains and features, is associated with 3998 variant alleles and maps to 1339 oligo probes.

Gene

This transcript is a product of gene ENSG00000204644.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000376883.2	ZFP57-201	2082	536aa	ENSP00000366080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43436	Q9NU63-3	NM_001109809.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000488757.6	ZFP57-202	1599	464aa	ENSP00000418259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS93878	A0A7I2S1M6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,082 bps, Translation length: 536 residues

MANE

This MANE Select transcript contains ENSP00000366080 and matches to NM_001109809.5 and NP_001103279.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NU63

CCDS

This transcript is a member of the Human CCDS set: CCDS43436

Transcript Support Level (TSL)

TSL:5

Version

ENST00000376883.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000376883.2 ZFP57-201

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Transcript: ENST00000376883.2 ZFP57-201

Summary

About Us

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