Description

KIAA1279 [Source:HGNC Symbol;Acc:HGNC:23419]

Synonyms

DKFZP586B0923, KBP, TTC20

Location
About this transcript

This transcript has 7 exons, is annotated with 3 domains and features, is associated with 159 variations and maps to 29 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
KIAA1279-001ENST000003619832544621aaENSP00000354848
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7284Q96EK5 NM_015634
NP_056449
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

KIAA1279-003ENST000006264932337297aaENSP00000486692
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
KIAA1279-004ENST00000627949811No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
KIAA1279-002ENST00000481912366No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

Transcript Support Level 3, when transcripts are supported by a single EST only.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

KIAA1279-005ENST00000625461576No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 7 Coding exons: 7 Transcript length: 2,544 bps Translation length: 621 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7284

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96EK5

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000361983.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays