Description

calmodulin 1 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:HGNC:1442]

Synonyms

CALML2, CAMI, DD132, PHKD

Location
About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 40 variations and maps to 40 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CALM1-001ENST000003569784242149aaENSP00000349467
 
Protein coding
CCDS9892B4DJ51 P62158 NM_006888
NP_008819
TSL:1GENCODE basicAPPRIS P2
CALM1-201ENST00000626705134183aaENSP00000486402
 
Protein coding
---TSL:5GENCODE basic
CALM1-004ENST000004476531104150aaENSP00000403491
 
Protein coding
-E7ETZ0 -TSL:2GENCODE basicAPPRIS ALT1
CALM1-006ENST000005442801064113aaENSP00000442853
 
Protein coding
-Q96HY3 NP_001292554
NP_001292555
TSL:1GENCODE basic
CALM1-012ENST00000553542877113aaENSP00000450829
 
Protein coding
-Q96HY3 NP_001292554
NP_001292555
TSL:5GENCODE basic
CALM1-007ENST0000055702055798aaENSP00000451062
 
Protein coding
-G3V361 -CDS 3' incompleteTSL:4
CALM1-003ENST00000553630142083aaENSP00000451646
 
Nonsense mediated decay
-G3V479 -TSL:5
CALM1-013ENST0000055342243876aaENSP00000450425
 
Nonsense mediated decay
-G3V226 -TSL:3
CALM1-016ENST00000555132554No protein-
 
Processed transcript
---TSL:4
CALM1-005ENST000005539642670No protein-
 
Retained intron
---TSL:1
CALM1-009ENST00000556757588No protein-
 
Retained intron
---TSL:2
CALM1-010ENST00000553995583No protein-
 
Retained intron
---TSL:2
CALM1-008ENST00000557123569No protein-
 
Retained intron
---TSL:3
CALM1-011ENST00000555267554No protein-
 
Retained intron
---TSL:2
CALM1-014ENST00000554296531No protein-
 
Retained intron
---TSL:2
CALM1-015ENST00000556721444No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 6 Coding exons: 6 Transcript length: 4,242 bps Translation length: 149 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9892

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62158

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000356978.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays