Description

huntingtin [Source:HGNC Symbol;Acc:HGNC:4851]

Synonyms

HD, IT15

Location
Gene

This transcript is a product of gene ENSG00000197386

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
HTT-001ENST0000035507213474 bp3142 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43206D2CTD2 D2CTD4 D2CTD7
D2CTD8 D3DVR8 P42858
NM_002111
NP_002102
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HTT-011ENST00000509618429 bp112 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
HTT-007ENST00000513806432 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
HTT-004ENST00000502820287 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
HTT-002ENST0000051062614438 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-006ENST00000506137781 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-009ENST00000509751723 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-013ENST00000512909611 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-010ENST00000512068401 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-003ENST00000508321386 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-012ENST00000509043380 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-005ENST00000513326373 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
HTT-008ENST00000513639259 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 67 Coding exons: 67 Transcript length: 13,474 bps Translation length: 3,142 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS43206

Uniprot

This transcript corresponds to the following Uniprot identifiers: P42858

Ensembl version

ENST00000355072.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays