Human (GRCh38.p14)
Description

synaptic Ras GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:11497]

Gene Synonyms

KIAA1938, RASA5, SYNGAP

Location
About this transcript

This transcript has 20 exons, is associated with 13694 variant alleles and maps to 873 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000646630.1SYNGAP1-22960151343aaENSP00000496007.1
 
Protein coding
CCDS34434Q96PV0-1 NM_006772.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000629380.3SYNGAP1-20860101343aaENSP00000486463.1
 
Protein coding
CCDS34434Q96PV0-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000418600.7SYNGAP1-20258271285aaENSP00000403636.3
 
Protein coding
Q96PV0-2 -GENCODE basicTSL:5
ENST00000682587.1SYNGAP1-23056041257aaENSP00000507403.1
 
Protein coding
A0A804HJ92 -GENCODE basic
ENST00000428982.4SYNGAP1-20343391284aaENSP00000412475.2
 
Protein coding
Q96PV0-3 -GENCODE basicTSL:5
ENST00000628646.2SYNGAP1-20742641299aaENSP00000486431.1
 
Protein coding
Q96PV0-4 -GENCODE basicTSL:5
ENST00000644458.1SYNGAP1-22740511308aaENSP00000495541.1
 
Protein coding
A0A2R8Y6T2 -GENCODE basic
ENST00000645250.1SYNGAP1-22840401249aaENSP00000494861.1
 
Protein coding
A0A2R8YDS2 -GENCODE basic
ENST00000449372.7SYNGAP1-20439291292aaENSP00000416519.4
 
Protein coding
CCDS93894B7ZCA0 -GENCODE basicTSL:5
ENST00000293748.9SYNGAP1-20145561284aaENSP00000293748.6
 
Nonsense mediated decay
A0A0A0MQZ2 -TSL:5CDS 5' incomplete
ENST00000638142.2SYNGAP1-2262499592aaENSP00000490803.1
 
Nonsense mediated decay
A0A1B0GW70 -TSL:5
ENST00000635885.1SYNGAP1-209191No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637721.1SYNGAP1-223190No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636116.1SYNGAP1-211161No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636146.1SYNGAP1-212161No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637911.1SYNGAP1-224157No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636075.1SYNGAP1-210148No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637490.1SYNGAP1-220132No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636640.1SYNGAP1-216118No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637194.1SYNGAP1-219100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637587.1SYNGAP1-221100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637052.1SYNGAP1-218100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636731.1SYNGAP1-217100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000638127.1SYNGAP1-225100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636193.1SYNGAP1-213100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000637671.1SYNGAP1-222100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636436.1SYNGAP1-214100No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636443.1SYNGAP1-21579No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000479510.2SYNGAP1-2062073No protein-
 
Retained intron
--TSL:2
ENST00000470232.1SYNGAP1-205394No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,556 bps, Translation length: 1,284 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000293748.9

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]