Description

POU class 3 homeobox 4 [Source:HGNC Symbol;Acc:HGNC:9217]

Synonyms

BRN4, DFN3, DFNX2, OTF9

Location
About this transcript

This transcript has 1 exon, is annotated with 14 domains and features, is associated with 284 variations and maps to 24 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
POU3F4-001ENST000003732003878361aaENSP00000362296
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14450P49335 NM_000307
NP_000298
TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 1 Coding exons: 1 Transcript length: 3,878 bps Translation length: 361 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS14450

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49335

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000373200.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
Annotation Attributes

3' standard supported extension [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays