Human (GRCh38.p14)
Description

collagen type XXVII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:22986]

Gene Synonyms

FLJ11895, KIAA1870, MGC11337

About this transcript

This transcript has 58 exons, is associated with 61941 variant alleles and maps to 1255 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000356083.8COL27A1-20178131860aaENSP00000348385.3
 
Protein coding
CCDS6802Q8IZC6-1 NM_032888.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000451716.5COL27A1-2022865714aaENSP00000391328.1
 
Protein coding
Q5T1U7 -TSL:1CDS 5' incomplete
ENST00000494090.6COL27A1-2075329485aaENSP00000432928.1
 
Nonsense mediated decay
H0YD40 -TSL:1CDS 5' incomplete
ENST00000477421.2COL27A1-2043991No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000468565.1COL27A1-2031946No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000490831.1COL27A1-206666No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000494780.1COL27A1-208514No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000485397.1COL27A1-205463No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 58, Coding exons: 14, Transcript length: 5,329 bps, Translation length: 485 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 5' incomplete

Version

ENST00000494090.6

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.