Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Synonyms

CELIAC1, HLA-DQA

Location
About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 200 variations and maps to 18 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
HLA-DQA1-001ENST000003431391591255aaENSP00000339398
 
Protein coding
CCDS4752P01909 NM_002122
NP_002113
TSL:NAGENCODE basicAPPRIS P1
HLA-DQA1-004ENST000003953631206255aaENSP00000378767
 
Protein coding
CCDS4752P01909 -TSL:NAGENCODE basicAPPRIS P1
HLA-DQA1-009ENST000003749491060255aaENSP00000364087
 
Protein coding
CCDS4752P01909 -TSL:NAGENCODE basicAPPRIS P1
HLA-DQA1-007ENST00000496318696214aaENSP00000437302
 
Protein coding
-E9PMV2 -CDS 3' incompleteTSL:NA
HLA-DQA1-010ENST0000042286352024aaENSP00000405797
 
Protein coding
-F6UB03 -CDS 3' incompleteTSL:NA
HLA-DQA1-002ENST00000482745213553aaENSP00000436546
 
Nonsense mediated decay
-E9PI37 -TSL:NA
HLA-DQA1-003ENST000004606335450No protein-
 
Retained intron
---TSL:NA
Statistics

Exons: 4 Coding exons: 4 Transcript length: 1,060 bps Translation length: 255 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4752

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01909

Transcript Support Level (TSL)

TSL:NA

Ensembl version

ENST00000374949.2

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays