Description

major histocompatibility complex, class II, DQ alpha 1 [Source:HGNC Symbol;Acc:HGNC:4942]

Synonyms

CELIAC1, HLA-DQA

Location
Gene

This transcript is a product of gene ENSG00000196735

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
HLA-DQA1-001ENST000003431391591 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4752F6UB03 O19703 P01909
Q30065 Q30066 Q67A92
Q67A93 Q67AA5 Q67AA6
Q67AA7 Q67AB5 Q67AB6
Q67AB7 Q67AB8 Q67AB9
Q67AC0 Q67AC1 Q67AC2
Q67AC3 Q67AC4 Q67AH6
Q67AH7 Q67AH8 Q67AH9
Q67AI0 Q67AI1 Q67AI2
NM_002122
NP_002113
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-004ENST000003953631206 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4752F6UB03 O19703 P01909
Q30065 Q30066 Q67A92
Q67A93 Q67AA5 Q67AA6
Q67AA7 Q67AB5 Q67AB6
Q67AB7 Q67AB8 Q67AB9
Q67AC0 Q67AC1 Q67AC2
Q67AC3 Q67AC4 Q67AH6
Q67AH7 Q67AH8 Q67AH9
Q67AI0 Q67AI1 Q67AI2
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-009ENST000003749491060 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4752F6UB03 O19703 P01909
Q30065 Q30066 Q67A92
Q67A93 Q67AA5 Q67AA6
Q67AA7 Q67AB5 Q67AB6
Q67AB7 Q67AB8 Q67AB9
Q67AC0 Q67AC1 Q67AC2
Q67AC3 Q67AC4 Q67AH6
Q67AH7 Q67AH8 Q67AH9
Q67AI0 Q67AI1 Q67AI2
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HLA-DQA1-007ENST00000496318696 bp214 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PMV2 F6UB03 O19703
Q67A92 Q67A93 Q67AA5
Q67AA6 Q67AA7 Q67AB5
Q67AB6 Q67AB7 Q67AB8
Q67AB9 Q67AC0 Q67AC1
Q67AC2 Q67AC3 Q67AC4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
HLA-DQA1-010ENST00000422863520 bp24 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6UB03 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
HLA-DQA1-002ENST000004827452135 bp53 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PI37 F6UB03 O19703
Q67A92 Q67A93 Q67AA5
Q67AA6 Q67AA7 Q67AB5
Q67AB6 Q67AB7 Q67AB8
Q67AB9 Q67AC0 Q67AC1
Q67AC2 Q67AC3 Q67AC4
-
HLA-DQA1-003ENST000004606335450 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 4 Coding exons: 1 Transcript length: 520 bps Translation length: 24 residues

Ensembl version

ENST00000422863.1

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays